Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 4933407L21Rik-201ENSMUST00000027426 1146 ntAPPRIS P5 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vcam1P29533 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Vcam1P29533 Lsm3-201ENSMUST00000040607 743 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vcam1P29533 Ms4a7-202ENSMUST00000056035 882 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Vcam1P29533 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vcam1P29533 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vcam1P29533 Prss57-201ENSMUST00000020573 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vcam1P29533 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Vcam1P29533 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vcam1P29533 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vcam1P29533 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Vcam1P29533 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Vcam1P29533 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vcam1P29533 Trh-201ENSMUST00000006046 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vcam1P29533 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vcam1P29533 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vcam1P29533 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vcam1P29533 Gm21136-201ENSMUST00000186812 2575 ntBASIC12.66□□□□□ -0.38
Vcam1P29533 Gm6605-201ENSMUST00000031488 2574 ntBASIC12.66□□□□□ -0.38
Vcam1P29533 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vcam1P29533 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vcam1P29533 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vcam1P29533 Gm11470-201ENSMUST00000118868 1475 ntBASIC12.65□□□□□ -0.38
Vcam1P29533 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC12.65□□□□□ -0.38
Vcam1P29533 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vcam1P29533 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vcam1P29533 Vangl1-208ENSMUST00000168312 1740 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Vcam1P29533 Gm38312-201ENSMUST00000195426 1746 ntBASIC12.65□□□□□ -0.38
Vcam1P29533 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vcam1P29533 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vcam1P29533 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Vcam1P29533 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vcam1P29533 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vcam1P29533 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Vcam1P29533 Gm5159-201ENSMUST00000212733 1652 ntBASIC12.65□□□□□ -0.38
Vcam1P29533 Slc38a4-202ENSMUST00000166223 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vcam1P29533 Ighv1-50-201ENSMUST00000103521 390 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Vcam1P29533 2610203C22Rik-201ENSMUST00000115480 1246 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Vcam1P29533 Sgcg-202ENSMUST00000121148 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vcam1P29533 Gm26313-201ENSMUST00000157770 308 ntBASIC12.65□□□□□ -0.38
Vcam1P29533 Gm16894-201ENSMUST00000181756 842 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Vcam1P29533 Gm42588-201ENSMUST00000200538 1297 ntBASIC12.65□□□□□ -0.38
Vcam1P29533 Gm7192-201ENSMUST00000210793 1137 ntBASIC12.65□□□□□ -0.38
Vcam1P29533 Gm5907-202ENSMUST00000210969 661 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Vcam1P29533 Gm9204-201ENSMUST00000212641 947 ntBASIC12.65□□□□□ -0.38
Vcam1P29533 Gm19990-201ENSMUST00000219468 1224 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Vcam1P29533 AC164099.1-201ENSMUST00000227780 333 ntBASIC12.65□□□□□ -0.38
Vcam1P29533 Bloc1s1-201ENSMUST00000026405 550 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vcam1P29533 Rasl11a-201ENSMUST00000031646 1126 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vcam1P29533 Fam3b-201ENSMUST00000049721 853 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vcam1P29533 Pbp2-201ENSMUST00000050471 1279 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Vcam1P29533 Csde1-207ENSMUST00000197827 2671 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.38
Vcam1P29533 AC124732.3-201ENSMUST00000221835 1765 ntBASIC12.65□□□□□ -0.38
Vcam1P29533 Pced1b-204ENSMUST00000228521 1790 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Vcam1P29533 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vcam1P29533 Mkrn1-ps1-201ENSMUST00000122035 1390 ntBASIC12.65□□□□□ -0.38
Vcam1P29533 Gm45165-201ENSMUST00000207763 1631 ntBASIC12.65□□□□□ -0.38
Vcam1P29533 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC12.65□□□□□ -0.38
Vcam1P29533 Krt34-201ENSMUST00000056362 1609 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vcam1P29533 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Vcam1P29533 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC12.65□□□□□ -0.38
Vcam1P29533 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vcam1P29533 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vcam1P29533 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vcam1P29533 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vcam1P29533 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.39
Vcam1P29533 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Vcam1P29533 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC12.64□□□□□ -0.39
Vcam1P29533 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vcam1P29533 Gm6560-201ENSMUST00000198588 1591 ntBASIC12.64□□□□□ -0.39
Vcam1P29533 Pigb-202ENSMUST00000098566 2193 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vcam1P29533 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12.64□□□□□ -0.39
Vcam1P29533 Gm19951-201ENSMUST00000222616 1328 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Vcam1P29533 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vcam1P29533 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vcam1P29533 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Vcam1P29533 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vcam1P29533 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vcam1P29533 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vcam1P29533 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Vcam1P29533 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vcam1P29533 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Vcam1P29533 Gcsam-202ENSMUST00000161347 1796 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vcam1P29533 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vcam1P29533 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Vcam1P29533 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Vcam1P29533 Moxd2-201ENSMUST00000031937 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vcam1P29533 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Vcam1P29533 Gm23769-201ENSMUST00000104441 121 ntBASIC12.64□□□□□ -0.39
Vcam1P29533 Olfr1263-201ENSMUST00000111507 1029 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Vcam1P29533 Nifk-202ENSMUST00000112688 849 ntTSL 5 BASIC12.64□□□□□ -0.39
Vcam1P29533 Gm8152-201ENSMUST00000120842 637 ntBASIC12.64□□□□□ -0.39
Vcam1P29533 Gm6441-201ENSMUST00000120983 696 ntBASIC12.64□□□□□ -0.39
Vcam1P29533 Gm12950-201ENSMUST00000121683 417 ntBASIC12.64□□□□□ -0.39
Vcam1P29533 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC12.64□□□□□ -0.39
Vcam1P29533 Gm16441-201ENSMUST00000138176 924 ntBASIC12.64□□□□□ -0.39
Vcam1P29533 Stk33-205ENSMUST00000141210 949 ntTSL 3 BASIC12.64□□□□□ -0.39
Vcam1P29533 Gm6038-201ENSMUST00000154310 948 ntBASIC12.64□□□□□ -0.39
Vcam1P29533 Gm24346-201ENSMUST00000158712 194 ntBASIC12.64□□□□□ -0.39
Vcam1P29533 1700001J11Rik-201ENSMUST00000185917 759 ntBASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 135.3 ms