Protein–RNA interactions for Protein: P27664

Pde6a, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6aP27664 Lsm8-201ENSMUST00000056398 807 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pde6aP27664 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pde6aP27664 Tra2b-204ENSMUST00000161286 3403 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pde6aP27664 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pde6aP27664 Gm16677-201ENSMUST00000181229 2174 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Pde6aP27664 Gm27174-201ENSMUST00000184493 2174 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Pde6aP27664 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Pde6aP27664 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Pde6aP27664 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC12.78□□□□□ -0.36
Pde6aP27664 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pde6aP27664 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pde6aP27664 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Pde6aP27664 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Pde6aP27664 Cfap53-201ENSMUST00000114895 1888 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pde6aP27664 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pde6aP27664 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC12.78□□□□□ -0.36
Pde6aP27664 Polr1e-203ENSMUST00000107814 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pde6aP27664 Hyal2-206ENSMUST00000195681 2968 ntBASIC12.78□□□□□ -0.36
Pde6aP27664 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pde6aP27664 Gm37031-201ENSMUST00000195487 2530 ntBASIC12.78□□□□□ -0.36
Pde6aP27664 Anxa3-205ENSMUST00000198631 1523 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Pde6aP27664 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Pde6aP27664 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Pde6aP27664 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Pde6aP27664 Cap1-201ENSMUST00000069533 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pde6aP27664 Megf11-202ENSMUST00000093829 3652 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Pde6aP27664 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pde6aP27664 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pde6aP27664 Cblb-203ENSMUST00000226593 3864 ntAPPRIS ALT2 BASIC12.77□□□□□ -0.36
Pde6aP27664 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pde6aP27664 Gfra2-201ENSMUST00000022699 3472 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pde6aP27664 Gfm2-202ENSMUST00000042084 3074 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Pde6aP27664 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pde6aP27664 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Pde6aP27664 Gm11380-201ENSMUST00000118067 560 ntBASIC12.77□□□□□ -0.37
Pde6aP27664 Gm6322-201ENSMUST00000118789 1004 ntBASIC12.77□□□□□ -0.37
Pde6aP27664 Mir1893-201ENSMUST00000122565 83 ntBASIC12.77□□□□□ -0.37
Pde6aP27664 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC12.77□□□□□ -0.37
Pde6aP27664 Gm22379-201ENSMUST00000157480 131 ntBASIC12.77□□□□□ -0.37
Pde6aP27664 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Pde6aP27664 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC12.77□□□□□ -0.37
Pde6aP27664 Myo1h-206ENSMUST00000196467 1208 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Pde6aP27664 Akr1c18-201ENSMUST00000021635 1200 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pde6aP27664 Prrxl1-205ENSMUST00000228878 723 ntBASIC12.77□□□□□ -0.37
Pde6aP27664 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pde6aP27664 Scgb2b2-201ENSMUST00000038835 520 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pde6aP27664 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Pde6aP27664 E330021D16Rik-201ENSMUST00000058713 1116 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Pde6aP27664 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pde6aP27664 n-R5s211-201ENSMUST00000093689 119 ntBASIC12.77□□□□□ -0.37
Pde6aP27664 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Pde6aP27664 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Pde6aP27664 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Pde6aP27664 Cyp2j13-202ENSMUST00000097973 1648 ntTSL 5 BASIC12.77□□□□□ -0.37
Pde6aP27664 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pde6aP27664 Slc13a5-202ENSMUST00000137701 1746 ntTSL 5 BASIC12.76□□□□□ -0.37
Pde6aP27664 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pde6aP27664 Gm10436-202ENSMUST00000220521 1788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pde6aP27664 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pde6aP27664 Sh3d21-201ENSMUST00000094760 1859 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pde6aP27664 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pde6aP27664 Gm5833-202ENSMUST00000190707 1932 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pde6aP27664 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Pde6aP27664 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pde6aP27664 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pde6aP27664 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pde6aP27664 Syncrip-208ENSMUST00000174282 3404 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pde6aP27664 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pde6aP27664 Gm25562-201ENSMUST00000104608 133 ntBASIC12.76□□□□□ -0.37
Pde6aP27664 Scp2-202ENSMUST00000106701 772 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pde6aP27664 Pfn1-202ENSMUST00000108549 608 ntTSL 2 BASIC12.76□□□□□ -0.37
Pde6aP27664 Mrpl55-205ENSMUST00000108787 718 ntTSL 2 BASIC12.76□□□□□ -0.37
Pde6aP27664 Gm14807-201ENSMUST00000116640 983 ntBASIC12.76□□□□□ -0.37
Pde6aP27664 Smim6-201ENSMUST00000132961 978 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pde6aP27664 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC12.76□□□□□ -0.37
Pde6aP27664 Gm26976-201ENSMUST00000182929 908 ntBASIC12.76□□□□□ -0.37
Pde6aP27664 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC12.76□□□□□ -0.37
Pde6aP27664 Ube2d3-216ENSMUST00000199613 738 ntAPPRIS P2 TSL 3 BASIC12.76□□□□□ -0.37
Pde6aP27664 Gm33080-201ENSMUST00000205429 172 ntBASIC12.76□□□□□ -0.37
Pde6aP27664 AC165249.1-202ENSMUST00000217990 734 ntTSL 3 BASIC12.76□□□□□ -0.37
Pde6aP27664 AC167364.1-201ENSMUST00000221495 784 ntTSL 5 BASIC12.76□□□□□ -0.37
Pde6aP27664 Olfr335-ps-201ENSMUST00000223545 939 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Pde6aP27664 AC134793.1-202ENSMUST00000227444 803 ntBASIC12.76□□□□□ -0.37
Pde6aP27664 Adipoq-201ENSMUST00000023593 1292 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pde6aP27664 1700001K19Rik-201ENSMUST00000070659 955 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pde6aP27664 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pde6aP27664 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pde6aP27664 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pde6aP27664 Nr1i3-201ENSMUST00000005820 1414 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pde6aP27664 Cdc20b-204ENSMUST00000181568 1494 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Pde6aP27664 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
Pde6aP27664 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pde6aP27664 Cops3-201ENSMUST00000019517 1646 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pde6aP27664 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pde6aP27664 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pde6aP27664 Gm43522-201ENSMUST00000196697 1922 ntBASIC12.76□□□□□ -0.37
Pde6aP27664 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pde6aP27664 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Pde6aP27664 AC164426.2-201ENSMUST00000225993 2492 ntBASIC12.76□□□□□ -0.37
Pde6aP27664 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms