Protein–RNA interactions for Protein: P0CG49

Ubb, Polyubiquitin-B, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UbbP0CG49 Lrpap1-201ENSMUST00000030986 2981 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
UbbP0CG49 Ddr1-201ENSMUST00000003628 3802 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
UbbP0CG49 Gm25125-201ENSMUST00000083340 136 ntBASIC9.6□□□□□ -0.87
UbbP0CG49 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
UbbP0CG49 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC9.6□□□□□ -0.87
UbbP0CG49 Fer1l5-202ENSMUST00000179162 6315 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
UbbP0CG49 Gm42853-201ENSMUST00000201273 1387 ntBASIC9.6□□□□□ -0.87
UbbP0CG49 Syn2-203ENSMUST00000203450 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
UbbP0CG49 Gm3372-201ENSMUST00000198806 1792 ntBASIC9.6□□□□□ -0.87
UbbP0CG49 Ifi211-201ENSMUST00000009340 1785 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
UbbP0CG49 Scn9a-201ENSMUST00000100063 9813 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
UbbP0CG49 Scn9a-202ENSMUST00000100064 9840 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
UbbP0CG49 Lasp1-201ENSMUST00000043843 3540 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
UbbP0CG49 Kcne2-202ENSMUST00000113971 1632 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
UbbP0CG49 Gm21039-201ENSMUST00000223359 2012 ntBASIC9.6□□□□□ -0.87
UbbP0CG49 Pum1-201ENSMUST00000030315 5389 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
UbbP0CG49 Rufy2-202ENSMUST00000119567 4130 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
UbbP0CG49 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC9.59□□□□□ -0.87
UbbP0CG49 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
UbbP0CG49 Mthfd1l-203ENSMUST00000120585 3687 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
UbbP0CG49 Myo1c-203ENSMUST00000102505 4652 ntAPPRIS ALT1 TSL 5 BASIC9.59□□□□□ -0.87
UbbP0CG49 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
UbbP0CG49 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC9.59□□□□□ -0.87
UbbP0CG49 Mkx-201ENSMUST00000079788 3202 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
UbbP0CG49 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
UbbP0CG49 Ccin-201ENSMUST00000095107 1941 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
UbbP0CG49 Col4a4-201ENSMUST00000087050 10108 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
UbbP0CG49 Ift88-201ENSMUST00000122063 3088 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
UbbP0CG49 5430419D17Rik-203ENSMUST00000208921 7948 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
UbbP0CG49 Ank2-214ENSMUST00000182547 2428 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
UbbP0CG49 Snord17-201ENSMUST00000104526 238 ntBASIC9.59□□□□□ -0.87
UbbP0CG49 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
UbbP0CG49 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC9.59□□□□□ -0.87
UbbP0CG49 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
UbbP0CG49 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
UbbP0CG49 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
UbbP0CG49 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
UbbP0CG49 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
UbbP0CG49 Gm3150-201ENSMUST00000166418 204 ntBASIC9.59□□□□□ -0.87
UbbP0CG49 H2-Q3-201ENSMUST00000172583 608 ntBASIC9.59□□□□□ -0.87
UbbP0CG49 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC9.59□□□□□ -0.87
UbbP0CG49 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
UbbP0CG49 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
UbbP0CG49 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
UbbP0CG49 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
UbbP0CG49 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC9.59□□□□□ -0.87
UbbP0CG49 Gm43822-201ENSMUST00000200285 476 ntBASIC9.59□□□□□ -0.87
UbbP0CG49 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC9.59□□□□□ -0.87
UbbP0CG49 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC9.59□□□□□ -0.87
UbbP0CG49 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC9.59□□□□□ -0.87
UbbP0CG49 CT009713.8-202ENSMUST00000224732 385 ntBASIC9.59□□□□□ -0.87
UbbP0CG49 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
UbbP0CG49 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC9.59□□□□□ -0.87
UbbP0CG49 Gm12333-201ENSMUST00000155508 2669 ntTSL 3 BASIC9.59□□□□□ -0.87
UbbP0CG49 Prss57-201ENSMUST00000020573 2693 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
UbbP0CG49 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
UbbP0CG49 AC124732.3-201ENSMUST00000221835 1765 ntBASIC9.59□□□□□ -0.87
UbbP0CG49 Gckr-202ENSMUST00000201166 2272 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
UbbP0CG49 Hoxa1-201ENSMUST00000000964 2251 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
UbbP0CG49 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC9.59□□□□□ -0.87
UbbP0CG49 Ehmt1-205ENSMUST00000114432 4539 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
UbbP0CG49 Gm7598-201ENSMUST00000130251 3123 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
UbbP0CG49 4933408B17Rik-201ENSMUST00000056932 2362 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
UbbP0CG49 Astn1-205ENSMUST00000193042 7248 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
UbbP0CG49 Svil-204ENSMUST00000127297 6243 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
UbbP0CG49 Gm4846-201ENSMUST00000143922 1744 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
UbbP0CG49 Pax3-201ENSMUST00000004994 3078 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
UbbP0CG49 Gm43972-201ENSMUST00000181398 1467 ntBASIC9.59□□□□□ -0.87
UbbP0CG49 Rassf2-201ENSMUST00000028814 8233 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
UbbP0CG49 Ap5z1-201ENSMUST00000038699 3689 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
UbbP0CG49 Gne-201ENSMUST00000030201 5384 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
UbbP0CG49 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC9.59□□□□□ -0.88
UbbP0CG49 9430064I24Rik-201ENSMUST00000206516 2669 ntBASIC9.59□□□□□ -0.88
UbbP0CG49 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.88
UbbP0CG49 Aplp2-202ENSMUST00000079758 3504 ntTSL 1 (best) BASIC9.59□□□□□ -0.88
UbbP0CG49 Gripap1-203ENSMUST00000115675 3015 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
UbbP0CG49 Ighmbp2-201ENSMUST00000025751 3720 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
UbbP0CG49 Lpin3-204ENSMUST00000109457 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
UbbP0CG49 Nrp2-202ENSMUST00000063594 6342 ntAPPRIS P4 TSL 1 (best) BASIC9.58□□□□□ -0.88
UbbP0CG49 Mybpc3-201ENSMUST00000111430 4154 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
UbbP0CG49 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
UbbP0CG49 Nos3-202ENSMUST00000115090 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
UbbP0CG49 Gm11298-201ENSMUST00000120503 1799 ntBASIC9.58□□□□□ -0.88
UbbP0CG49 Nfe2l1-203ENSMUST00000107658 4219 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
UbbP0CG49 Gm43713-201ENSMUST00000198251 1896 ntTSL 5 BASIC9.58□□□□□ -0.88
UbbP0CG49 St7-204ENSMUST00000077080 1887 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
UbbP0CG49 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
UbbP0CG49 Gm22323-201ENSMUST00000103832 109 ntBASIC9.58□□□□□ -0.88
UbbP0CG49 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
UbbP0CG49 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
UbbP0CG49 Gm12715-201ENSMUST00000121430 1128 ntBASIC9.58□□□□□ -0.88
UbbP0CG49 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC9.58□□□□□ -0.88
UbbP0CG49 Gm24990-201ENSMUST00000157406 323 ntBASIC9.58□□□□□ -0.88
UbbP0CG49 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
UbbP0CG49 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
UbbP0CG49 Gm7741-201ENSMUST00000181445 989 ntBASIC9.58□□□□□ -0.88
UbbP0CG49 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC9.58□□□□□ -0.88
UbbP0CG49 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
UbbP0CG49 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
UbbP0CG49 Saa-ps-201ENSMUST00000211148 320 ntBASIC9.58□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms