Protein–RNA interactions for Protein: P09225

Lta, Lymphotoxin-alpha, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LtaP09225 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
LtaP09225 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
LtaP09225 Samd4-206ENSMUST00000137543 6874 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
LtaP09225 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
LtaP09225 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC9.05□□□□□ -0.96
LtaP09225 Gm43963-201ENSMUST00000203466 2488 ntBASIC9.05□□□□□ -0.96
LtaP09225 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC9.05□□□□□ -0.96
LtaP09225 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
LtaP09225 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
LtaP09225 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
LtaP09225 Gm37368-201ENSMUST00000193173 3212 ntBASIC9.05□□□□□ -0.96
LtaP09225 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
LtaP09225 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
LtaP09225 Slc10a7-201ENSMUST00000034111 3595 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
LtaP09225 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
LtaP09225 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
LtaP09225 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC9.04□□□□□ -0.96
LtaP09225 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
LtaP09225 Gm6024-201ENSMUST00000117850 1558 ntBASIC9.04□□□□□ -0.96
LtaP09225 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC9.04□□□□□ -0.96
LtaP09225 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
LtaP09225 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
LtaP09225 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
LtaP09225 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
LtaP09225 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
LtaP09225 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
LtaP09225 Sass6-204ENSMUST00000197335 2458 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
LtaP09225 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
LtaP09225 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
LtaP09225 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
LtaP09225 Gm25063-201ENSMUST00000104666 94 ntBASIC9.04□□□□□ -0.96
LtaP09225 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
LtaP09225 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
LtaP09225 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC9.04□□□□□ -0.96
LtaP09225 Gm13937-201ENSMUST00000121000 988 ntBASIC9.04□□□□□ -0.96
LtaP09225 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC9.04□□□□□ -0.96
LtaP09225 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
LtaP09225 Gm25554-201ENSMUST00000158075 113 ntBASIC9.04□□□□□ -0.96
LtaP09225 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
LtaP09225 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
LtaP09225 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
LtaP09225 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC9.04□□□□□ -0.96
LtaP09225 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC9.04□□□□□ -0.96
LtaP09225 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC9.04□□□□□ -0.96
LtaP09225 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC9.04□□□□□ -0.96
LtaP09225 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC9.04□□□□□ -0.96
LtaP09225 Gm40639-201ENSMUST00000214642 625 ntTSL 5 BASIC9.04□□□□□ -0.96
LtaP09225 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
LtaP09225 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC9.04□□□□□ -0.96
LtaP09225 n-R5s211-201ENSMUST00000093689 119 ntBASIC9.04□□□□□ -0.96
LtaP09225 CT010480.4-201ENSMUST00000224654 2283 ntBASIC9.04□□□□□ -0.96
LtaP09225 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
LtaP09225 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
LtaP09225 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
LtaP09225 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
LtaP09225 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
LtaP09225 AC130823.1-201ENSMUST00000228929 1549 ntBASIC9.04□□□□□ -0.96
LtaP09225 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
LtaP09225 Ntrk2-207ENSMUST00000225488 4706 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
LtaP09225 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC9.04□□□□□ -0.96
LtaP09225 Zdbf2-202ENSMUST00000114132 12629 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
LtaP09225 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
LtaP09225 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
LtaP09225 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
LtaP09225 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
LtaP09225 Mapkbp1-201ENSMUST00000066058 6942 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
LtaP09225 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
LtaP09225 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
LtaP09225 Madd-213ENSMUST00000111376 5927 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
LtaP09225 Faim2-201ENSMUST00000023750 4520 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
LtaP09225 Gm19178-201ENSMUST00000217524 1819 ntBASIC9.03□□□□□ -0.96
LtaP09225 Gm43972-201ENSMUST00000181398 1467 ntBASIC9.03□□□□□ -0.96
LtaP09225 Uaca-201ENSMUST00000050183 4428 ntAPPRIS P2 TSL 1 (best) BASIC9.03□□□□□ -0.96
LtaP09225 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC9.03□□□□□ -0.96
LtaP09225 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
LtaP09225 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
LtaP09225 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
LtaP09225 Pde4b-206ENSMUST00000106907 1374 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
LtaP09225 Gm5822-201ENSMUST00000161562 1378 ntBASIC9.03□□□□□ -0.96
LtaP09225 Dlgap1-214ENSMUST00000155016 4712 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
LtaP09225 Gm21136-201ENSMUST00000186812 2575 ntBASIC9.03□□□□□ -0.96
LtaP09225 Gm6605-201ENSMUST00000031488 2574 ntBASIC9.03□□□□□ -0.96
LtaP09225 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
LtaP09225 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
LtaP09225 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC9.03□□□□□ -0.96
LtaP09225 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
LtaP09225 Igkv3-10-201ENSMUST00000103397 356 ntAPPRIS ALT2 BASIC9.03□□□□□ -0.96
LtaP09225 Mir453-201ENSMUST00000104732 82 ntBASIC9.03□□□□□ -0.96
LtaP09225 Cat-202ENSMUST00000111168 779 ntTSL 3 BASIC9.03□□□□□ -0.96
LtaP09225 Gm14807-201ENSMUST00000116640 983 ntBASIC9.03□□□□□ -0.96
LtaP09225 Gm12986-201ENSMUST00000119037 967 ntBASIC9.03□□□□□ -0.96
LtaP09225 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
LtaP09225 Gm20471-201ENSMUST00000172793 626 ntTSL 3 BASIC9.03□□□□□ -0.96
LtaP09225 Gm23153-201ENSMUST00000175323 313 ntBASIC9.03□□□□□ -0.96
LtaP09225 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC9.03□□□□□ -0.96
LtaP09225 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
LtaP09225 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC9.03□□□□□ -0.96
LtaP09225 Mir7032-201ENSMUST00000185154 79 ntBASIC9.03□□□□□ -0.96
LtaP09225 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
LtaP09225 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC9.03□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms