Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Gm43152-201ENSMUST00000202495 1638 ntBASIC11.35□□□□□ -0.59
CopeO89079 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC11.35□□□□□ -0.59
CopeO89079 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
CopeO89079 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
CopeO89079 Nos3-202ENSMUST00000115090 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
CopeO89079 Cstf1-201ENSMUST00000116375 3451 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
CopeO89079 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
CopeO89079 Gramd1b-212ENSMUST00000165104 3824 ntAPPRIS P2 TSL 5 BASIC11.34□□□□□ -0.59
CopeO89079 Psat1-205ENSMUST00000162053 2291 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
CopeO89079 Adcy7-202ENSMUST00000168545 5937 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
CopeO89079 Gm20715-201ENSMUST00000054781 4460 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
CopeO89079 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC11.34□□□□□ -0.59
CopeO89079 Gm26686-201ENSMUST00000181951 3467 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
CopeO89079 Myo9a-203ENSMUST00000128341 11985 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
CopeO89079 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC11.34□□□□□ -0.59
CopeO89079 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
CopeO89079 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
CopeO89079 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
CopeO89079 Gm23694-201ENSMUST00000179335 110 ntBASIC11.34□□□□□ -0.59
CopeO89079 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
CopeO89079 Gm7985-201ENSMUST00000183329 981 ntBASIC11.34□□□□□ -0.59
CopeO89079 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC11.34□□□□□ -0.59
CopeO89079 Gm43179-201ENSMUST00000198797 275 ntBASIC11.34□□□□□ -0.59
CopeO89079 4930478P22Rik-202ENSMUST00000201921 723 ntTSL 3 BASIC11.34□□□□□ -0.59
CopeO89079 Gm9826-201ENSMUST00000029124 1299 ntBASIC11.34□□□□□ -0.59
CopeO89079 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
CopeO89079 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
CopeO89079 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
CopeO89079 Kcnn3-201ENSMUST00000000811 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
CopeO89079 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
CopeO89079 Tom1l2-204ENSMUST00000095254 4940 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
CopeO89079 Axin2-202ENSMUST00000106711 2551 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
CopeO89079 Dgkh-201ENSMUST00000074729 3967 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
CopeO89079 Fam228a-201ENSMUST00000111154 3004 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
CopeO89079 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
CopeO89079 Gm37264-201ENSMUST00000194916 2192 ntBASIC11.34□□□□□ -0.59
CopeO89079 Gm7742-201ENSMUST00000167648 1527 ntBASIC11.34□□□□□ -0.59
CopeO89079 Gm7732-201ENSMUST00000170486 1527 ntBASIC11.34□□□□□ -0.59
CopeO89079 Gm7740-201ENSMUST00000186171 1527 ntBASIC11.34□□□□□ -0.59
CopeO89079 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
CopeO89079 Gm7736-201ENSMUST00000096981 1527 ntBASIC11.34□□□□□ -0.59
CopeO89079 Scn9a-201ENSMUST00000100063 9813 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
CopeO89079 Scn9a-202ENSMUST00000100064 9840 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
CopeO89079 Rasgrp4-213ENSMUST00000204845 3182 ntTSL 5 BASIC11.34□□□□□ -0.59
CopeO89079 Morf4l2-201ENSMUST00000033797 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
CopeO89079 Scamp1-203ENSMUST00000152555 1877 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
CopeO89079 Gm45675-201ENSMUST00000211202 3429 ntBASIC11.34□□□□□ -0.59
CopeO89079 Dcun1d2-204ENSMUST00000110840 2853 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
CopeO89079 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC11.33□□□□□ -0.59
CopeO89079 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CopeO89079 Gm10643-201ENSMUST00000098592 1577 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
CopeO89079 Zbtb21-202ENSMUST00000063605 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
CopeO89079 Gm13398-201ENSMUST00000149378 2837 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
CopeO89079 Qtrt2-201ENSMUST00000023387 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CopeO89079 Pygl-201ENSMUST00000071250 2825 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CopeO89079 Tcn2-206ENSMUST00000109992 1945 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
CopeO89079 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
CopeO89079 Bdh1-203ENSMUST00000115227 3122 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CopeO89079 Gm13350-201ENSMUST00000120519 479 ntBASIC11.33□□□□□ -0.6
CopeO89079 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC11.33□□□□□ -0.6
CopeO89079 Gm11244-201ENSMUST00000121243 237 ntBASIC11.33□□□□□ -0.6
CopeO89079 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC11.33□□□□□ -0.6
CopeO89079 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
CopeO89079 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
CopeO89079 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
CopeO89079 Gm5733-201ENSMUST00000190232 939 ntBASIC11.33□□□□□ -0.6
CopeO89079 Gm42682-201ENSMUST00000198349 1265 ntBASIC11.33□□□□□ -0.6
CopeO89079 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
CopeO89079 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC11.33□□□□□ -0.6
CopeO89079 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC11.33□□□□□ -0.6
CopeO89079 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CopeO89079 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
CopeO89079 Ntng1-201ENSMUST00000051253 327 ntBASIC11.33□□□□□ -0.6
CopeO89079 Gne-201ENSMUST00000030201 5384 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
CopeO89079 Cnr2-202ENSMUST00000097843 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CopeO89079 Abcf1-201ENSMUST00000043757 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CopeO89079 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
CopeO89079 Fn1-203ENSMUST00000186129 7797 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
CopeO89079 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CopeO89079 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC11.33□□□□□ -0.6
CopeO89079 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CopeO89079 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CopeO89079 Ccdc167-203ENSMUST00000129091 2256 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
CopeO89079 Fam198b-202ENSMUST00000118853 6729 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
CopeO89079 Rnf121-203ENSMUST00000106953 2545 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
CopeO89079 Pxdn-208ENSMUST00000220271 6377 ntTSL 5 BASIC11.33□□□□□ -0.6
CopeO89079 Maob-201ENSMUST00000040820 2411 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CopeO89079 Gpc4-201ENSMUST00000033450 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CopeO89079 Uimc1-204ENSMUST00000127195 2936 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
CopeO89079 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC11.32□□□□□ -0.6
CopeO89079 Tcp10a-202ENSMUST00000128533 2589 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
CopeO89079 1600014C10Rik-202ENSMUST00000165308 3335 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
CopeO89079 1600014C10Rik-204ENSMUST00000178207 3341 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
CopeO89079 Zfp110-201ENSMUST00000004614 3591 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CopeO89079 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
CopeO89079 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CopeO89079 Prrx1-201ENSMUST00000027878 4952 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CopeO89079 Wbp1l-202ENSMUST00000111855 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
CopeO89079 Prox1-203ENSMUST00000177288 3144 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
CopeO89079 Gm6768-201ENSMUST00000022467 1878 ntBASIC11.32□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms