Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC11.54□□□□□ -0.56
Chmp2aQ9DB34 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Chmp2aQ9DB34 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Chmp2aQ9DB34 Zdhhc3-208ENSMUST00000147563 6987 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Chmp2aQ9DB34 Rfesd-201ENSMUST00000050997 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Chmp2aQ9DB34 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Chmp2aQ9DB34 Col11a1-201ENSMUST00000092155 7667 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Chmp2aQ9DB34 Trim36-202ENSMUST00000167364 4543 ntTSL 5 BASIC11.54□□□□□ -0.56
Chmp2aQ9DB34 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Chmp2aQ9DB34 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC11.54□□□□□ -0.56
Chmp2aQ9DB34 Gm17213-201ENSMUST00000165161 1360 ntBASIC11.54□□□□□ -0.56
Chmp2aQ9DB34 Phc1-204ENSMUST00000159252 3744 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Chmp2aQ9DB34 Pcsk9-201ENSMUST00000049507 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Chmp2aQ9DB34 Gm37849-201ENSMUST00000194722 1881 ntBASIC11.53□□□□□ -0.56
Chmp2aQ9DB34 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Chmp2aQ9DB34 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Chmp2aQ9DB34 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Chmp2aQ9DB34 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Chmp2aQ9DB34 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Chmp2aQ9DB34 AC113282.1-201ENSMUST00000225278 1707 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Chmp2aQ9DB34 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Chmp2aQ9DB34 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Chmp2aQ9DB34 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Chmp2aQ9DB34 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Chmp2aQ9DB34 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
Chmp2aQ9DB34 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Chmp2aQ9DB34 Gm12899-201ENSMUST00000120565 551 ntBASIC11.53□□□□□ -0.56
Chmp2aQ9DB34 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC11.53□□□□□ -0.56
Chmp2aQ9DB34 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC11.53□□□□□ -0.56
Chmp2aQ9DB34 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC11.53□□□□□ -0.56
Chmp2aQ9DB34 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Chmp2aQ9DB34 Mir3547-201ENSMUST00000175461 88 ntBASIC11.53□□□□□ -0.56
Chmp2aQ9DB34 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Chmp2aQ9DB34 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC11.53□□□□□ -0.56
Chmp2aQ9DB34 Gm43380-201ENSMUST00000200421 220 ntBASIC11.53□□□□□ -0.56
Chmp2aQ9DB34 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC11.53□□□□□ -0.56
Chmp2aQ9DB34 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
Chmp2aQ9DB34 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC11.53□□□□□ -0.56
Chmp2aQ9DB34 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Chmp2aQ9DB34 Gm45594-201ENSMUST00000211717 241 ntBASIC11.53□□□□□ -0.56
Chmp2aQ9DB34 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC11.53□□□□□ -0.56
Chmp2aQ9DB34 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Chmp2aQ9DB34 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Chmp2aQ9DB34 Gm23680-201ENSMUST00000083162 164 ntBASIC11.53□□□□□ -0.56
Chmp2aQ9DB34 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Chmp2aQ9DB34 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Chmp2aQ9DB34 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Chmp2aQ9DB34 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Chmp2aQ9DB34 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Chmp2aQ9DB34 Mroh8-202ENSMUST00000143663 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Chmp2aQ9DB34 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Chmp2aQ9DB34 Gm19178-201ENSMUST00000217524 1819 ntBASIC11.53□□□□□ -0.56
Chmp2aQ9DB34 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Chmp2aQ9DB34 Gtf3c2-201ENSMUST00000088010 4552 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Chmp2aQ9DB34 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Chmp2aQ9DB34 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC11.53□□□□□ -0.56
Chmp2aQ9DB34 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Chmp2aQ9DB34 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Chmp2aQ9DB34 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.56
Chmp2aQ9DB34 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Chmp2aQ9DB34 Ciita-201ENSMUST00000023147 5254 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Chmp2aQ9DB34 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC11.52□□□□□ -0.56
Chmp2aQ9DB34 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Chmp2aQ9DB34 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Chmp2aQ9DB34 Gm37014-201ENSMUST00000194723 2253 ntBASIC11.52□□□□□ -0.56
Chmp2aQ9DB34 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Chmp2aQ9DB34 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Chmp2aQ9DB34 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
Chmp2aQ9DB34 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC11.52□□□□□ -0.56
Chmp2aQ9DB34 Dzip1l-204ENSMUST00000112886 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Chmp2aQ9DB34 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Chmp2aQ9DB34 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Chmp2aQ9DB34 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC11.52□□□□□ -0.57
Chmp2aQ9DB34 Atp11c-202ENSMUST00000101527 6044 ntAPPRIS P4 TSL 1 (best) BASIC11.52□□□□□ -0.57
Chmp2aQ9DB34 Rnft2-201ENSMUST00000117177 4381 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Chmp2aQ9DB34 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC11.52□□□□□ -0.57
Chmp2aQ9DB34 Gm12208-201ENSMUST00000122004 163 ntBASIC11.52□□□□□ -0.57
Chmp2aQ9DB34 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC11.52□□□□□ -0.57
Chmp2aQ9DB34 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC11.52□□□□□ -0.57
Chmp2aQ9DB34 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC11.52□□□□□ -0.57
Chmp2aQ9DB34 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Chmp2aQ9DB34 Gm34023-201ENSMUST00000195539 217 ntBASIC11.52□□□□□ -0.57
Chmp2aQ9DB34 Gm42816-201ENSMUST00000198433 325 ntBASIC11.52□□□□□ -0.57
Chmp2aQ9DB34 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC11.52□□□□□ -0.57
Chmp2aQ9DB34 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC11.52□□□□□ -0.57
Chmp2aQ9DB34 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Chmp2aQ9DB34 Gm30671-201ENSMUST00000214898 318 ntBASIC11.52□□□□□ -0.57
Chmp2aQ9DB34 AC136376.2-201ENSMUST00000228819 490 ntBASIC11.52□□□□□ -0.57
Chmp2aQ9DB34 Nme6-201ENSMUST00000035053 1074 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Chmp2aQ9DB34 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Chmp2aQ9DB34 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.57
Chmp2aQ9DB34 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Chmp2aQ9DB34 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Chmp2aQ9DB34 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Chmp2aQ9DB34 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC11.52□□□□□ -0.57
Chmp2aQ9DB34 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC11.52□□□□□ -0.57
Chmp2aQ9DB34 Gm29684-201ENSMUST00000220248 1982 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Chmp2aQ9DB34 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Chmp2aQ9DB34 Col9a1-201ENSMUST00000054588 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Chmp2aQ9DB34 Ptp4a3-203ENSMUST00000165541 3539 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms