Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Scaf4Q6PFF0 Mkl1-204ENSMUST00000134469 4392 ntTSL 5 BASIC10.88□□□□□ -0.67
Scaf4Q6PFF0 Adcy8-202ENSMUST00000228014 6900 ntAPPRIS ALT2 BASIC10.88□□□□□ -0.67
Scaf4Q6PFF0 Col5a2-201ENSMUST00000086430 6625 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Scaf4Q6PFF0 A130010J15Rik-205ENSMUST00000178744 3782 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
Scaf4Q6PFF0 Olfr370-203ENSMUST00000214156 2475 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Scaf4Q6PFF0 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Scaf4Q6PFF0 Ly6e-202ENSMUST00000169343 2154 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Scaf4Q6PFF0 Dzip1l-204ENSMUST00000112886 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Scaf4Q6PFF0 Gosr2-201ENSMUST00000021329 3266 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Scaf4Q6PFF0 Ccdc136-207ENSMUST00000154619 3356 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Scaf4Q6PFF0 St6galnac4-201ENSMUST00000102818 3626 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Scaf4Q6PFF0 Zfp217-202ENSMUST00000109155 5670 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Scaf4Q6PFF0 Gm26686-201ENSMUST00000181951 3467 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Scaf4Q6PFF0 Sp100-201ENSMUST00000054279 1978 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Scaf4Q6PFF0 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Scaf4Q6PFF0 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Scaf4Q6PFF0 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC10.87□□□□□ -0.67
Scaf4Q6PFF0 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Scaf4Q6PFF0 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC10.87□□□□□ -0.67
Scaf4Q6PFF0 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC10.87□□□□□ -0.67
Scaf4Q6PFF0 Rab7b-205ENSMUST00000136247 497 ntTSL 5 BASIC10.87□□□□□ -0.67
Scaf4Q6PFF0 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Scaf4Q6PFF0 Gm7741-201ENSMUST00000181445 989 ntBASIC10.87□□□□□ -0.67
Scaf4Q6PFF0 Gm29283-201ENSMUST00000187394 288 ntTSL 5 BASIC10.87□□□□□ -0.67
Scaf4Q6PFF0 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC10.87□□□□□ -0.67
Scaf4Q6PFF0 CT010486.3-201ENSMUST00000224555 811 ntBASIC10.87□□□□□ -0.67
Scaf4Q6PFF0 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Scaf4Q6PFF0 Mir219a-1-201ENSMUST00000083621 110 ntBASIC10.87□□□□□ -0.67
Scaf4Q6PFF0 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC10.87□□□□□ -0.67
Scaf4Q6PFF0 Ppp6r2-201ENSMUST00000088788 2887 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Scaf4Q6PFF0 Pop1-202ENSMUST00000079028 3275 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Scaf4Q6PFF0 Gm6714-201ENSMUST00000218677 2330 ntBASIC10.87□□□□□ -0.67
Scaf4Q6PFF0 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Scaf4Q6PFF0 Pcdh20-202ENSMUST00000192557 3362 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Scaf4Q6PFF0 Il1rap-202ENSMUST00000096129 4438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Scaf4Q6PFF0 C2-206ENSMUST00000152417 2157 ntTSL 5 BASIC10.87□□□□□ -0.67
Scaf4Q6PFF0 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Scaf4Q6PFF0 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC10.87□□□□□ -0.67
Scaf4Q6PFF0 Gckr-202ENSMUST00000201166 2272 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Scaf4Q6PFF0 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Scaf4Q6PFF0 6430548M08Rik-203ENSMUST00000108950 3125 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Scaf4Q6PFF0 Slc16a7-202ENSMUST00000105257 2238 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Scaf4Q6PFF0 Ciita-201ENSMUST00000023147 5254 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Scaf4Q6PFF0 Pex26-203ENSMUST00000120066 3861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Scaf4Q6PFF0 Gm13694-201ENSMUST00000178533 2493 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Scaf4Q6PFF0 Gm13693-201ENSMUST00000178960 2493 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Scaf4Q6PFF0 Gm13698-202ENSMUST00000179192 2493 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Scaf4Q6PFF0 Gm13696-202ENSMUST00000180347 2493 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Scaf4Q6PFF0 Gm13691-201ENSMUST00000099947 2493 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Scaf4Q6PFF0 Gm13697-201ENSMUST00000099948 2493 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Scaf4Q6PFF0 Gm13695-201ENSMUST00000099951 2493 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Scaf4Q6PFF0 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Scaf4Q6PFF0 Pigc-205ENSMUST00000193784 4207 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Scaf4Q6PFF0 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC10.86□□□□□ -0.67
Scaf4Q6PFF0 H2-M10.3-201ENSMUST00000073546 1593 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Scaf4Q6PFF0 Krt33b-201ENSMUST00000073890 1581 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Scaf4Q6PFF0 Sema3b-203ENSMUST00000102530 3410 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Scaf4Q6PFF0 Zc3hav1-201ENSMUST00000031850 3400 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Scaf4Q6PFF0 Il16-203ENSMUST00000145610 3183 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Scaf4Q6PFF0 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Scaf4Q6PFF0 Gm26527-201ENSMUST00000180416 1948 ntTSL 5 BASIC10.86□□□□□ -0.67
Scaf4Q6PFF0 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Scaf4Q6PFF0 Actn2-201ENSMUST00000064204 3013 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Scaf4Q6PFF0 Zmym3-209ENSMUST00000121520 5564 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Scaf4Q6PFF0 Thbd-201ENSMUST00000099270 3723 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Scaf4Q6PFF0 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Scaf4Q6PFF0 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Scaf4Q6PFF0 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Scaf4Q6PFF0 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC10.86□□□□□ -0.67
Scaf4Q6PFF0 Gm12570-201ENSMUST00000122047 1030 ntBASIC10.86□□□□□ -0.67
Scaf4Q6PFF0 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC10.86□□□□□ -0.67
Scaf4Q6PFF0 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Scaf4Q6PFF0 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Scaf4Q6PFF0 Gm24844-201ENSMUST00000158679 127 ntBASIC10.86□□□□□ -0.67
Scaf4Q6PFF0 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Scaf4Q6PFF0 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Scaf4Q6PFF0 Gm9639-201ENSMUST00000172205 678 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Scaf4Q6PFF0 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Scaf4Q6PFF0 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Scaf4Q6PFF0 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Scaf4Q6PFF0 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Scaf4Q6PFF0 Gm7985-201ENSMUST00000183329 981 ntBASIC10.86□□□□□ -0.67
Scaf4Q6PFF0 Gm9540-201ENSMUST00000188230 478 ntBASIC10.86□□□□□ -0.67
Scaf4Q6PFF0 Ighv1-48-201ENSMUST00000191795 294 ntBASIC10.86□□□□□ -0.67
Scaf4Q6PFF0 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Scaf4Q6PFF0 Gm5869-201ENSMUST00000200248 1257 ntBASIC10.86□□□□□ -0.67
Scaf4Q6PFF0 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Scaf4Q6PFF0 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC10.86□□□□□ -0.67
Scaf4Q6PFF0 AC153962.4-201ENSMUST00000217878 242 ntBASIC10.86□□□□□ -0.67
Scaf4Q6PFF0 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC10.86□□□□□ -0.67
Scaf4Q6PFF0 Gm12216-207ENSMUST00000220191 1073 ntAPPRIS P5 TSL 5 BASIC10.86□□□□□ -0.67
Scaf4Q6PFF0 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Scaf4Q6PFF0 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Scaf4Q6PFF0 Ddr1-201ENSMUST00000003628 3802 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Scaf4Q6PFF0 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Scaf4Q6PFF0 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Scaf4Q6PFF0 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Scaf4Q6PFF0 Zbtb21-202ENSMUST00000063605 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Scaf4Q6PFF0 Rnf20-201ENSMUST00000029989 4154 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 61.7 ms