Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clcn1Q64347 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clcn1Q64347 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Clcn1Q64347 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
Clcn1Q64347 Gm12474-201ENSMUST00000122898 1410 ntTSL 2 BASIC14.16□□□□□ -0.14
Clcn1Q64347 Ap5s1-201ENSMUST00000089506 1432 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Clcn1Q64347 Gm43152-201ENSMUST00000202495 1638 ntBASIC14.16□□□□□ -0.14
Clcn1Q64347 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clcn1Q64347 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clcn1Q64347 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clcn1Q64347 Npl-201ENSMUST00000041874 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clcn1Q64347 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clcn1Q64347 Gm38140-201ENSMUST00000193617 2755 ntBASIC14.16□□□□□ -0.14
Clcn1Q64347 Ube2d-ps-201ENSMUST00000121354 441 ntBASIC14.16□□□□□ -0.14
Clcn1Q64347 Gm13802-201ENSMUST00000150159 663 ntTSL 3 BASIC14.16□□□□□ -0.14
Clcn1Q64347 Gm9372-201ENSMUST00000168454 430 ntBASIC14.16□□□□□ -0.14
Clcn1Q64347 Gm37229-201ENSMUST00000191643 732 ntTSL 3 BASIC14.16□□□□□ -0.14
Clcn1Q64347 Gm37782-201ENSMUST00000194879 678 ntBASIC14.16□□□□□ -0.14
Clcn1Q64347 Gm37017-201ENSMUST00000195266 747 ntBASIC14.16□□□□□ -0.14
Clcn1Q64347 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clcn1Q64347 Gm4265-201ENSMUST00000206701 674 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Clcn1Q64347 Nps-202ENSMUST00000210697 1082 ntTSL 5 BASIC14.16□□□□□ -0.14
Clcn1Q64347 Gm9204-201ENSMUST00000212641 947 ntBASIC14.16□□□□□ -0.14
Clcn1Q64347 Acy1-211ENSMUST00000216400 1030 ntTSL 5 BASIC14.16□□□□□ -0.14
Clcn1Q64347 Cib4-201ENSMUST00000065486 769 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clcn1Q64347 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clcn1Q64347 Gm13271-201ENSMUST00000094992 549 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Clcn1Q64347 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Clcn1Q64347 Gm43075-201ENSMUST00000198613 3905 ntBASIC14.16□□□□□ -0.14
Clcn1Q64347 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC14.16□□□□□ -0.14
Clcn1Q64347 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Clcn1Q64347 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clcn1Q64347 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Clcn1Q64347 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clcn1Q64347 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clcn1Q64347 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Clcn1Q64347 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clcn1Q64347 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clcn1Q64347 Brcc3-203ENSMUST00000118428 2093 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Clcn1Q64347 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clcn1Q64347 Kif2c-202ENSMUST00000106436 2378 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Clcn1Q64347 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clcn1Q64347 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clcn1Q64347 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC14.16□□□□□ -0.14
Clcn1Q64347 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Clcn1Q64347 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC14.16□□□□□ -0.14
Clcn1Q64347 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
Clcn1Q64347 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Clcn1Q64347 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clcn1Q64347 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clcn1Q64347 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clcn1Q64347 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Clcn1Q64347 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Clcn1Q64347 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clcn1Q64347 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC14.15□□□□□ -0.14
Clcn1Q64347 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clcn1Q64347 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Clcn1Q64347 Unc119-202ENSMUST00000100755 933 ntTSL 2 BASIC14.15□□□□□ -0.14
Clcn1Q64347 Plac8-203ENSMUST00000112910 1224 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Clcn1Q64347 Gm12702-201ENSMUST00000123258 612 ntTSL 3 BASIC14.15□□□□□ -0.14
Clcn1Q64347 Gm14133-201ENSMUST00000139471 1274 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Clcn1Q64347 Pet100-201ENSMUST00000156380 1193 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clcn1Q64347 Fxyd5-203ENSMUST00000159924 805 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
Clcn1Q64347 Fxyd5-210ENSMUST00000162116 817 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
Clcn1Q64347 Snord55-201ENSMUST00000174939 79 ntBASIC14.15□□□□□ -0.14
Clcn1Q64347 4933417D19Rik-201ENSMUST00000181432 1229 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Clcn1Q64347 Gm43244-201ENSMUST00000196994 1285 ntBASIC14.15□□□□□ -0.14
Clcn1Q64347 Gm44511-201ENSMUST00000204394 678 ntAPPRIS P5 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clcn1Q64347 Gm44511-202ENSMUST00000204423 678 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clcn1Q64347 Gm2448-201ENSMUST00000207080 559 ntBASIC14.15□□□□□ -0.14
Clcn1Q64347 Gm4903-201ENSMUST00000210462 405 ntBASIC14.15□□□□□ -0.14
Clcn1Q64347 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Clcn1Q64347 Gm14005-208ENSMUST00000223654 681 ntBASIC14.15□□□□□ -0.14
Clcn1Q64347 Rpl3-201ENSMUST00000081650 1293 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clcn1Q64347 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clcn1Q64347 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC14.15□□□□□ -0.14
Clcn1Q64347 Ugt1a10-201ENSMUST00000113142 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clcn1Q64347 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clcn1Q64347 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Clcn1Q64347 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC14.15□□□□□ -0.14
Clcn1Q64347 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clcn1Q64347 Anxa3-205ENSMUST00000198631 1523 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Clcn1Q64347 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC14.15□□□□□ -0.14
Clcn1Q64347 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clcn1Q64347 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC14.15□□□□□ -0.15
Clcn1Q64347 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clcn1Q64347 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clcn1Q64347 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC14.14□□□□□ -0.15
Clcn1Q64347 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clcn1Q64347 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Clcn1Q64347 Gm37651-201ENSMUST00000194679 1494 ntBASIC14.14□□□□□ -0.15
Clcn1Q64347 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clcn1Q64347 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clcn1Q64347 Usp2-208ENSMUST00000177054 2370 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Clcn1Q64347 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC14.14□□□□□ -0.15
Clcn1Q64347 Lemd1-201ENSMUST00000112357 964 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clcn1Q64347 Cidec-203ENSMUST00000113091 785 ntAPPRIS ALT1 TSL 3 BASIC14.14□□□□□ -0.15
Clcn1Q64347 Surf6-202ENSMUST00000114043 894 ntTSL 5 BASIC14.14□□□□□ -0.15
Clcn1Q64347 Ccnb1-ps-201ENSMUST00000155338 1287 ntBASIC14.14□□□□□ -0.15
Clcn1Q64347 Gm3329-201ENSMUST00000159873 556 ntBASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 79.8 ms