Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Col19a1-202ENSMUST00000115244 4266 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Upk2P38575 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Upk2P38575 Optc-205ENSMUST00000153617 1615 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Upk2P38575 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
Upk2P38575 Zfp869-201ENSMUST00000080987 1590 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Upk2P38575 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Upk2P38575 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Upk2P38575 Xlr4c-201ENSMUST00000068551 1500 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Upk2P38575 Trmt12-201ENSMUST00000036937 4454 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Upk2P38575 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Upk2P38575 Gm26912-201ENSMUST00000180988 1483 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Upk2P38575 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Upk2P38575 Thoc6-202ENSMUST00000095579 1450 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Upk2P38575 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Upk2P38575 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC9.67□□□□□ -0.86
Upk2P38575 4930594M22Rik-202ENSMUST00000161599 3595 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Upk2P38575 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Upk2P38575 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Upk2P38575 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Upk2P38575 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Upk2P38575 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Upk2P38575 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Upk2P38575 Gfra2-203ENSMUST00000227697 1323 ntBASIC9.67□□□□□ -0.86
Upk2P38575 Mobp-202ENSMUST00000093773 3286 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Upk2P38575 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Upk2P38575 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC9.67□□□□□ -0.86
Upk2P38575 Gm12136-201ENSMUST00000120460 1209 ntBASIC9.67□□□□□ -0.86
Upk2P38575 Gm15197-201ENSMUST00000120526 478 ntBASIC9.67□□□□□ -0.86
Upk2P38575 n-R5s14-201ENSMUST00000122688 107 ntBASIC9.67□□□□□ -0.86
Upk2P38575 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC9.67□□□□□ -0.86
Upk2P38575 Gm17391-201ENSMUST00000171036 126 ntBASIC9.67□□□□□ -0.86
Upk2P38575 Mir5132-201ENSMUST00000175166 71 ntBASIC9.67□□□□□ -0.86
Upk2P38575 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC9.67□□□□□ -0.86
Upk2P38575 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Upk2P38575 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Upk2P38575 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Upk2P38575 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC9.67□□□□□ -0.86
Upk2P38575 Gm38321-201ENSMUST00000195053 235 ntBASIC9.67□□□□□ -0.86
Upk2P38575 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Upk2P38575 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC9.67□□□□□ -0.86
Upk2P38575 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC9.67□□□□□ -0.86
Upk2P38575 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC9.67□□□□□ -0.86
Upk2P38575 Gm18042-201ENSMUST00000219887 790 ntBASIC9.67□□□□□ -0.86
Upk2P38575 Gm12216-207ENSMUST00000220191 1073 ntAPPRIS P5 TSL 5 BASIC9.67□□□□□ -0.86
Upk2P38575 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC9.67□□□□□ -0.86
Upk2P38575 AC125070.1-201ENSMUST00000223523 555 ntTSL 5 BASIC9.67□□□□□ -0.86
Upk2P38575 CT009527.1-201ENSMUST00000224205 339 ntBASIC9.67□□□□□ -0.86
Upk2P38575 AC154849.4-201ENSMUST00000224868 365 ntBASIC9.67□□□□□ -0.86
Upk2P38575 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Upk2P38575 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC9.67□□□□□ -0.86
Upk2P38575 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
Upk2P38575 Gm6768-201ENSMUST00000022467 1878 ntBASIC9.67□□□□□ -0.86
Upk2P38575 Cfap54-201ENSMUST00000020200 2473 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Upk2P38575 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC9.67□□□□□ -0.86
Upk2P38575 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Upk2P38575 Gm5859-201ENSMUST00000165401 2324 ntBASIC9.67□□□□□ -0.86
Upk2P38575 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Upk2P38575 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Upk2P38575 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC9.67□□□□□ -0.86
Upk2P38575 Dcst2-201ENSMUST00000208216 2285 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Upk2P38575 Ppat-202ENSMUST00000140076 3981 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Upk2P38575 Rin1-208ENSMUST00000225427 4503 ntAPPRIS P2 BASIC9.67□□□□□ -0.86
Upk2P38575 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Upk2P38575 Prr30-202ENSMUST00000187304 2104 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Upk2P38575 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Upk2P38575 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Upk2P38575 Sptbn5-204ENSMUST00000156159 3625 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Upk2P38575 Gm37031-201ENSMUST00000195487 2530 ntBASIC9.66□□□□□ -0.86
Upk2P38575 Arid2-201ENSMUST00000096250 8507 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Upk2P38575 AC164426.2-201ENSMUST00000225993 2492 ntBASIC9.66□□□□□ -0.86
Upk2P38575 Pdgfrb-201ENSMUST00000025522 5407 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Upk2P38575 Uaca-201ENSMUST00000050183 4428 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Upk2P38575 Lztr1-202ENSMUST00000115681 3394 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Upk2P38575 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC9.66□□□□□ -0.86
Upk2P38575 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC9.66□□□□□ -0.86
Upk2P38575 Mettl14-204ENSMUST00000174323 4202 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Upk2P38575 Prg4-201ENSMUST00000006171 1869 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Upk2P38575 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Upk2P38575 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC9.66□□□□□ -0.86
Upk2P38575 Pde4b-206ENSMUST00000106907 1374 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Upk2P38575 Ikzf2-204ENSMUST00000188110 1365 ntTSL 5 BASIC9.66□□□□□ -0.86
Upk2P38575 Ikzf2-208ENSMUST00000190855 1359 ntTSL 5 BASIC9.66□□□□□ -0.86
Upk2P38575 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Upk2P38575 Dglucy-204ENSMUST00000110073 3184 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Upk2P38575 Nmt2-201ENSMUST00000081932 4461 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Upk2P38575 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Upk2P38575 Ppp6r3-201ENSMUST00000025846 4841 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
Upk2P38575 Mroh8-202ENSMUST00000143663 3460 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Upk2P38575 Lrrc8a-201ENSMUST00000095078 4301 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Upk2P38575 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Upk2P38575 Gm4846-201ENSMUST00000143922 1744 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Upk2P38575 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Upk2P38575 C2cd5-201ENSMUST00000087485 4265 ntTSL 5 BASIC9.66□□□□□ -0.86
Upk2P38575 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC9.66□□□□□ -0.86
Upk2P38575 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Upk2P38575 Mipep-ps-201ENSMUST00000177439 291 ntBASIC9.66□□□□□ -0.86
Upk2P38575 Gm7985-201ENSMUST00000183329 981 ntBASIC9.66□□□□□ -0.86
Upk2P38575 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC9.66□□□□□ -0.86
Upk2P38575 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC9.66□□□□□ -0.86
Upk2P38575 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms