Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gm3150-201ENSMUST00000166418 204 ntBASIC9.96□□□□□ -0.82
Pcdh1F7BJK1 Gm43667-201ENSMUST00000198616 1095 ntBASIC9.96□□□□□ -0.82
Pcdh1F7BJK1 Gm8342-201ENSMUST00000209839 757 ntBASIC9.96□□□□□ -0.82
Pcdh1F7BJK1 Fos-201ENSMUST00000021674 2108 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Pcdh1F7BJK1 Gm34868-201ENSMUST00000218341 530 ntTSL 3 BASIC9.96□□□□□ -0.82
Pcdh1F7BJK1 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC9.96□□□□□ -0.82
Pcdh1F7BJK1 AC154436.1-201ENSMUST00000227272 782 ntBASIC9.96□□□□□ -0.82
Pcdh1F7BJK1 AC133602.1-201ENSMUST00000227510 509 ntBASIC9.96□□□□□ -0.82
Pcdh1F7BJK1 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Pcdh1F7BJK1 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Pcdh1F7BJK1 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Pcdh1F7BJK1 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Pcdh1F7BJK1 Tgfb1i1-201ENSMUST00000070656 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Pcdh1F7BJK1 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Pcdh1F7BJK1 Nanog-201ENSMUST00000012540 2211 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.82
Pcdh1F7BJK1 Slc18a1-201ENSMUST00000037478 3115 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Pcdh1F7BJK1 Inf2-201ENSMUST00000101029 4001 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Pcdh1F7BJK1 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Pcdh1F7BJK1 Gm18642-201ENSMUST00000206642 1400 ntBASIC9.96□□□□□ -0.82
Pcdh1F7BJK1 Abi1-206ENSMUST00000126112 3360 ntAPPRIS ALT1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Pcdh1F7BJK1 AC140462.2-201ENSMUST00000225718 2433 ntBASIC9.96□□□□□ -0.82
Pcdh1F7BJK1 Dzip1l-203ENSMUST00000112885 4350 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.82
Pcdh1F7BJK1 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Pcdh1F7BJK1 Gm7742-201ENSMUST00000167648 1527 ntBASIC9.96□□□□□ -0.82
Pcdh1F7BJK1 Gm7732-201ENSMUST00000170486 1527 ntBASIC9.96□□□□□ -0.82
Pcdh1F7BJK1 Gm7740-201ENSMUST00000186171 1527 ntBASIC9.96□□□□□ -0.82
Pcdh1F7BJK1 Gm7736-201ENSMUST00000096981 1527 ntBASIC9.96□□□□□ -0.82
Pcdh1F7BJK1 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Pcdh1F7BJK1 Mrgpre-201ENSMUST00000054048 3761 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Pcdh1F7BJK1 Slc7a4-201ENSMUST00000063544 2758 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Pcdh1F7BJK1 Dnmbp-206ENSMUST00000212592 3901 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Pcdh1F7BJK1 Tsc22d4-202ENSMUST00000100539 3983 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Pcdh1F7BJK1 Atg9a-205ENSMUST00000188347 4041 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
Pcdh1F7BJK1 Gtf3c2-201ENSMUST00000088010 4552 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Pcdh1F7BJK1 Filip1l-202ENSMUST00000159414 3253 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Pcdh1F7BJK1 Arid2-201ENSMUST00000096250 8507 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Pcdh1F7BJK1 Gm19040-201ENSMUST00000203280 4726 ntBASIC9.95□□□□□ -0.82
Pcdh1F7BJK1 Gm9244-201ENSMUST00000056767 2129 ntBASIC9.95□□□□□ -0.82
Pcdh1F7BJK1 Cox17-202ENSMUST00000120495 3690 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Pcdh1F7BJK1 Pdgfrb-201ENSMUST00000025522 5407 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Pcdh1F7BJK1 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC9.95□□□□□ -0.82
Pcdh1F7BJK1 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Pcdh1F7BJK1 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Pcdh1F7BJK1 Cd2bp2-203ENSMUST00000205316 2912 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Pcdh1F7BJK1 Ern2-201ENSMUST00000033153 2914 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Pcdh1F7BJK1 Slc25a44-203ENSMUST00000193433 3429 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Pcdh1F7BJK1 Ikbkb-201ENSMUST00000033939 3580 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Pcdh1F7BJK1 Gm11941-201ENSMUST00000119904 610 ntBASIC9.95□□□□□ -0.82
Pcdh1F7BJK1 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC9.95□□□□□ -0.82
Pcdh1F7BJK1 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC9.95□□□□□ -0.82
Pcdh1F7BJK1 Gm25881-201ENSMUST00000157783 103 ntBASIC9.95□□□□□ -0.82
Pcdh1F7BJK1 0610040B10Rik-202ENSMUST00000162890 600 ntTSL 5 BASIC9.95□□□□□ -0.82
Pcdh1F7BJK1 Gm19246-201ENSMUST00000173599 255 ntBASIC9.95□□□□□ -0.82
Pcdh1F7BJK1 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC9.95□□□□□ -0.82
Pcdh1F7BJK1 Gm38319-201ENSMUST00000194537 1266 ntBASIC9.95□□□□□ -0.82
Pcdh1F7BJK1 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC9.95□□□□□ -0.82
Pcdh1F7BJK1 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Pcdh1F7BJK1 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC9.95□□□□□ -0.82
Pcdh1F7BJK1 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Pcdh1F7BJK1 Gm25125-201ENSMUST00000083340 136 ntBASIC9.95□□□□□ -0.82
Pcdh1F7BJK1 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Pcdh1F7BJK1 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Pcdh1F7BJK1 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Pcdh1F7BJK1 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Pcdh1F7BJK1 Gm37651-201ENSMUST00000194679 1494 ntBASIC9.95□□□□□ -0.82
Pcdh1F7BJK1 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Pcdh1F7BJK1 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC9.95□□□□□ -0.82
Pcdh1F7BJK1 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC9.95□□□□□ -0.82
Pcdh1F7BJK1 Rpap1-201ENSMUST00000048493 4744 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Pcdh1F7BJK1 Gm13920-201ENSMUST00000146134 1663 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Pcdh1F7BJK1 Dhcr7-211ENSMUST00000207143 1652 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Pcdh1F7BJK1 Armc9-201ENSMUST00000027434 5127 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Pcdh1F7BJK1 Katnal2-208ENSMUST00000137498 1824 ntTSL 5 BASIC9.95□□□□□ -0.82
Pcdh1F7BJK1 Myc-206ENSMUST00000167731 1821 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Pcdh1F7BJK1 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Pcdh1F7BJK1 Aspm-201ENSMUST00000053364 9867 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Pcdh1F7BJK1 Tmem92-201ENSMUST00000100554 2043 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Pcdh1F7BJK1 Platr4-203ENSMUST00000199155 2161 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Pcdh1F7BJK1 Srpx2-201ENSMUST00000033606 2290 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Pcdh1F7BJK1 March10-201ENSMUST00000049995 3074 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Pcdh1F7BJK1 1600014C10Rik-202ENSMUST00000165308 3335 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Pcdh1F7BJK1 1600014C10Rik-204ENSMUST00000178207 3341 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Pcdh1F7BJK1 Ttc7b-206ENSMUST00000223020 3307 ntTSL 5 BASIC9.95□□□□□ -0.82
Pcdh1F7BJK1 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Pcdh1F7BJK1 Ppp1r10-201ENSMUST00000087210 4222 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Pcdh1F7BJK1 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Pcdh1F7BJK1 Tiam1-204ENSMUST00000114124 7406 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Pcdh1F7BJK1 Pdp2-201ENSMUST00000059588 5692 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Pcdh1F7BJK1 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Pcdh1F7BJK1 Lactb2-201ENSMUST00000027071 4494 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Pcdh1F7BJK1 Gm42641-202ENSMUST00000160217 4248 ntAPPRIS P5 TSL 2 BASIC9.94□□□□□ -0.82
Pcdh1F7BJK1 Lig3-210ENSMUST00000173347 3631 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Pcdh1F7BJK1 Cep112-201ENSMUST00000061287 3485 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Pcdh1F7BJK1 Specc1-214ENSMUST00000202389 3363 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Pcdh1F7BJK1 Zfp605-202ENSMUST00000112528 3158 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Pcdh1F7BJK1 Marveld2-201ENSMUST00000022137 3061 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Pcdh1F7BJK1 Gm10827-201ENSMUST00000181897 2586 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Pcdh1F7BJK1 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Pcdh1F7BJK1 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Pcdh1F7BJK1 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC9.94□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms