Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Use1-203ENSMUST00000110054 973 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
Ush2AQ2QI47 Gm12003-201ENSMUST00000118518 1105 ntBASIC5.62□□□□□ -1.51
Ush2AQ2QI47 Gm11670-201ENSMUST00000143435 511 ntTSL 2 BASIC5.62□□□□□ -1.51
Ush2AQ2QI47 1700057H15Rik-202ENSMUST00000143859 704 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Ush2AQ2QI47 Gm7083-201ENSMUST00000178617 450 ntBASIC5.62□□□□□ -1.51
Ush2AQ2QI47 Gm36028-202ENSMUST00000205931 1161 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Ush2AQ2QI47 Rpl18a-ps4-201ENSMUST00000206176 536 ntBASIC5.62□□□□□ -1.51
Ush2AQ2QI47 AC167364.1-201ENSMUST00000221495 784 ntTSL 5 BASIC5.62□□□□□ -1.51
Ush2AQ2QI47 Glt8d2-202ENSMUST00000065815 1240 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Ush2AQ2QI47 Gm4825-201ENSMUST00000079690 408 ntBASIC5.62□□□□□ -1.51
Ush2AQ2QI47 AC124577.2-201ENSMUST00000217413 2420 ntBASIC5.62□□□□□ -1.51
Ush2AQ2QI47 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Ush2AQ2QI47 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Ush2AQ2QI47 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Ush2AQ2QI47 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Ush2AQ2QI47 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Ush2AQ2QI47 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC5.62□□□□□ -1.51
Ush2AQ2QI47 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Ush2AQ2QI47 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Ush2AQ2QI47 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Ush2AQ2QI47 Oscp1-203ENSMUST00000143712 1473 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Ush2AQ2QI47 Ppp6c-205ENSMUST00000204701 1495 ntTSL 5 BASIC5.62□□□□□ -1.51
Ush2AQ2QI47 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC5.62□□□□□ -1.51
Ush2AQ2QI47 Fhad1os1-201ENSMUST00000146094 997 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Ush2AQ2QI47 Gm12236-201ENSMUST00000152968 250 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Ush2AQ2QI47 Car1-203ENSMUST00000181860 1194 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Ush2AQ2QI47 Gm27913-201ENSMUST00000184473 173 ntBASIC5.62□□□□□ -1.51
Ush2AQ2QI47 Mir6919-201ENSMUST00000185146 62 ntBASIC5.62□□□□□ -1.51
Ush2AQ2QI47 Nanog-ps1-201ENSMUST00000188967 250 ntBASIC5.62□□□□□ -1.51
Ush2AQ2QI47 Gm45521-201ENSMUST00000211339 676 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Ush2AQ2QI47 AC124484.1-201ENSMUST00000223212 652 ntBASIC5.62□□□□□ -1.51
Ush2AQ2QI47 Slurp1-201ENSMUST00000023261 567 ntTSL 5 BASIC5.62□□□□□ -1.51
Ush2AQ2QI47 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Ush2AQ2QI47 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC5.62□□□□□ -1.51
Ush2AQ2QI47 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Ush2AQ2QI47 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Ush2AQ2QI47 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Ush2AQ2QI47 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Ush2AQ2QI47 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Ush2AQ2QI47 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Ush2AQ2QI47 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Ush2AQ2QI47 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Ush2AQ2QI47 Il27ra-201ENSMUST00000005601 2664 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Ush2AQ2QI47 Gm31108-201ENSMUST00000204101 1633 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Ush2AQ2QI47 Olfr353-201ENSMUST00000100149 936 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Ush2AQ2QI47 Gm24471-201ENSMUST00000104485 131 ntBASIC5.62□□□□□ -1.51
Ush2AQ2QI47 Gm14592-201ENSMUST00000117201 560 ntBASIC5.62□□□□□ -1.51
Ush2AQ2QI47 Platr12-201ENSMUST00000141027 462 ntTSL 3 BASIC5.62□□□□□ -1.51
Ush2AQ2QI47 Gm28546-201ENSMUST00000188221 615 ntBASIC5.62□□□□□ -1.51
Ush2AQ2QI47 Fxyd4-208ENSMUST00000204950 586 ntTSL 3 BASIC5.62□□□□□ -1.51
Ush2AQ2QI47 Gzma-202ENSMUST00000224282 996 ntAPPRIS ALT2 BASIC5.62□□□□□ -1.51
Ush2AQ2QI47 CT025689.5-201ENSMUST00000224316 986 ntBASIC5.62□□□□□ -1.51
Ush2AQ2QI47 Fxyd5-201ENSMUST00000009831 803 ntAPPRIS ALT2 TSL 3 BASIC5.62□□□□□ -1.51
Ush2AQ2QI47 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Ush2AQ2QI47 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Ush2AQ2QI47 Gap43-201ENSMUST00000102817 1420 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Ush2AQ2QI47 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC5.62□□□□□ -1.51
Ush2AQ2QI47 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC5.62□□□□□ -1.51
Ush2AQ2QI47 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Ush2AQ2QI47 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Ush2AQ2QI47 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
Ush2AQ2QI47 Ubap2l-203ENSMUST00000090908 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Ush2AQ2QI47 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Ush2AQ2QI47 Rita1-202ENSMUST00000111884 733 ntTSL 2 BASIC5.61□□□□□ -1.51
Ush2AQ2QI47 Gm13303-201ENSMUST00000117125 1284 ntBASIC5.61□□□□□ -1.51
Ush2AQ2QI47 Gm13877-201ENSMUST00000120614 417 ntBASIC5.61□□□□□ -1.51
Ush2AQ2QI47 Gm13017-201ENSMUST00000156409 400 ntTSL 3 BASIC5.61□□□□□ -1.51
Ush2AQ2QI47 Rab25-201ENSMUST00000008745 1081 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Ush2AQ2QI47 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Ush2AQ2QI47 Gm43435-201ENSMUST00000199996 1438 ntBASIC5.61□□□□□ -1.51
Ush2AQ2QI47 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Ush2AQ2QI47 Abhd4-201ENSMUST00000041197 2401 ntAPPRIS P4 TSL 1 (best) BASIC5.61□□□□□ -1.51
Ush2AQ2QI47 Mageb4-201ENSMUST00000096378 2401 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Ush2AQ2QI47 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
Ush2AQ2QI47 Gm42527-201ENSMUST00000198173 1480 ntBASIC5.61□□□□□ -1.51
Ush2AQ2QI47 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Ush2AQ2QI47 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Ush2AQ2QI47 Cphx3-201ENSMUST00000163305 1653 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Ush2AQ2QI47 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Ush2AQ2QI47 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Ush2AQ2QI47 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Ush2AQ2QI47 Gm11258-201ENSMUST00000121086 1218 ntBASIC5.61□□□□□ -1.51
Ush2AQ2QI47 Pou1f1-203ENSMUST00000176038 1174 ntTSL 5 BASIC5.61□□□□□ -1.51
Ush2AQ2QI47 Gm42867-201ENSMUST00000202995 469 ntBASIC5.61□□□□□ -1.51
Ush2AQ2QI47 Nxpe1-ps-202ENSMUST00000210160 956 ntTSL 5 BASIC5.61□□□□□ -1.51
Ush2AQ2QI47 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Ush2AQ2QI47 Rnf219-204ENSMUST00000228448 1056 ntAPPRIS ALT2 BASIC5.61□□□□□ -1.51
Ush2AQ2QI47 Rpl32-201ENSMUST00000081840 517 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Ush2AQ2QI47 6330409D20Rik-201ENSMUST00000009695 1119 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Ush2AQ2QI47 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Ush2AQ2QI47 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Ush2AQ2QI47 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC5.61□□□□□ -1.51
Ush2AQ2QI47 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Ush2AQ2QI47 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC5.61□□□□□ -1.51
Ush2AQ2QI47 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Ush2AQ2QI47 Ccr6-202ENSMUST00000164411 1553 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Ush2AQ2QI47 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Ush2AQ2QI47 Gm12727-201ENSMUST00000119885 359 ntBASIC5.61□□□□□ -1.51
Ush2AQ2QI47 Gm12121-201ENSMUST00000131630 500 ntTSL 3 BASIC5.61□□□□□ -1.51
Ush2AQ2QI47 n-R5s210-201ENSMUST00000177688 119 ntBASIC5.61□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms