Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Rfx3P48381 Gm9785-201ENSMUST00000062642 1006 ntBASIC10.02□□□□□ -0.81
Rfx3P48381 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC10.02□□□□□ -0.81
Rfx3P48381 Zfp629-203ENSMUST00000122066 5850 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Rfx3P48381 Atp9b-201ENSMUST00000091790 5357 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
Rfx3P48381 Olfr370-203ENSMUST00000214156 2475 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
Rfx3P48381 Dlgap1-214ENSMUST00000155016 4712 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
Rfx3P48381 Nup50-201ENSMUST00000165443 4741 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Rfx3P48381 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Rfx3P48381 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
Rfx3P48381 Nmt2-201ENSMUST00000081932 4461 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Rfx3P48381 D930048N14Rik-202ENSMUST00000117859 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Rfx3P48381 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Rfx3P48381 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Rfx3P48381 Ctsb-201ENSMUST00000006235 4743 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Rfx3P48381 Fcamr-202ENSMUST00000112477 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Rfx3P48381 Cycs-202ENSMUST00000161401 3123 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Rfx3P48381 Amz1-202ENSMUST00000120630 4037 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Rfx3P48381 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Rfx3P48381 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC10.02□□□□□ -0.81
Rfx3P48381 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC10.02□□□□□ -0.81
Rfx3P48381 Fam234b-201ENSMUST00000111915 4221 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Rfx3P48381 Zbtb21-203ENSMUST00000113734 6010 ntAPPRIS P4 TSL 2 BASIC10.02□□□□□ -0.81
Rfx3P48381 Slc9a8-202ENSMUST00000073873 4429 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
Rfx3P48381 Sla2-202ENSMUST00000109561 2634 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Rfx3P48381 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Rfx3P48381 Bbs2-201ENSMUST00000034206 3064 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Rfx3P48381 Ankrd52-201ENSMUST00000014642 6620 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Rfx3P48381 Olfr707-204ENSMUST00000213251 1777 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Rfx3P48381 Gm37031-201ENSMUST00000195487 2530 ntBASIC10.01□□□□□ -0.81
Rfx3P48381 Inf2-201ENSMUST00000101029 4001 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Rfx3P48381 Bco1-203ENSMUST00000176860 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Rfx3P48381 Asap1-202ENSMUST00000110114 4409 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
Rfx3P48381 Bcl9-201ENSMUST00000046521 6102 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Rfx3P48381 Col20a1-202ENSMUST00000149179 3867 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
Rfx3P48381 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC10.01□□□□□ -0.81
Rfx3P48381 Stat1-211ENSMUST00000189347 2588 ntAPPRIS ALT1 TSL 5 BASIC10.01□□□□□ -0.81
Rfx3P48381 Ddx52-201ENSMUST00000049257 3194 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Rfx3P48381 Grik1-201ENSMUST00000023652 3554 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Rfx3P48381 Kif19a-201ENSMUST00000084368 3433 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Rfx3P48381 Gm12217-201ENSMUST00000118858 696 ntBASIC10.01□□□□□ -0.81
Rfx3P48381 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Rfx3P48381 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Rfx3P48381 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Rfx3P48381 Gm7741-201ENSMUST00000181445 989 ntBASIC10.01□□□□□ -0.81
Rfx3P48381 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Rfx3P48381 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC10.01□□□□□ -0.81
Rfx3P48381 Gm37246-201ENSMUST00000192665 835 ntBASIC10.01□□□□□ -0.81
Rfx3P48381 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Rfx3P48381 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Rfx3P48381 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC10.01□□□□□ -0.81
Rfx3P48381 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Rfx3P48381 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Rfx3P48381 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC10.01□□□□□ -0.81
Rfx3P48381 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Rfx3P48381 CT009713.8-201ENSMUST00000225448 560 ntBASIC10.01□□□□□ -0.81
Rfx3P48381 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Rfx3P48381 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Rfx3P48381 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
Rfx3P48381 Kif3c-201ENSMUST00000020999 6791 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Rfx3P48381 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Rfx3P48381 Gm15883-201ENSMUST00000153562 1690 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Rfx3P48381 Imp4-201ENSMUST00000027303 5836 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Rfx3P48381 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Rfx3P48381 Alas1-202ENSMUST00000112524 3089 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Rfx3P48381 Trmt12-201ENSMUST00000036937 4454 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
Rfx3P48381 Hepacam-201ENSMUST00000051839 3347 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Rfx3P48381 Olfr707-205ENSMUST00000214112 1735 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Rfx3P48381 Gm28424-201ENSMUST00000187393 1319 ntBASIC10.01□□□□□ -0.81
Rfx3P48381 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC10.01□□□□□ -0.81
Rfx3P48381 Kat7-205ENSMUST00000107734 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Rfx3P48381 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
Rfx3P48381 Abcf1-201ENSMUST00000043757 3161 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Rfx3P48381 Dchs1-201ENSMUST00000078482 10754 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Rfx3P48381 Nrg1-213ENSMUST00000208617 2787 ntTSL 5 BASIC10.01□□□□□ -0.81
Rfx3P48381 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Rfx3P48381 Lactb2-201ENSMUST00000027071 4494 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Rfx3P48381 Ndor1-201ENSMUST00000100329 4517 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Rfx3P48381 Adgrl3-215ENSMUST00000120673 5178 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
Rfx3P48381 Gm6903-201ENSMUST00000160509 1366 ntBASIC10.01□□□□□ -0.81
Rfx3P48381 AC109214.1-201ENSMUST00000219520 1372 ntBASIC10.01□□□□□ -0.81
Rfx3P48381 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Rfx3P48381 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Rfx3P48381 Tasp1-203ENSMUST00000110079 2258 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Rfx3P48381 4930512J16Rik-201ENSMUST00000203704 1859 ntTSL 1 (best) BASIC10□□□□□ -0.81
Rfx3P48381 Magt1-204ENSMUST00000151689 4531 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Rfx3P48381 Limch1-201ENSMUST00000038188 5903 ntTSL 1 (best) BASIC10□□□□□ -0.81
Rfx3P48381 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Rfx3P48381 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC10□□□□□ -0.81
Rfx3P48381 A330033J07Rik-201ENSMUST00000180921 2816 ntTSL 1 (best) BASIC10□□□□□ -0.81
Rfx3P48381 Tcn2-206ENSMUST00000109992 1945 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
Rfx3P48381 AC129336.2-201ENSMUST00000218053 3086 ntBASIC10□□□□□ -0.81
Rfx3P48381 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Rfx3P48381 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC10□□□□□ -0.81
Rfx3P48381 Gm11573-201ENSMUST00000119956 394 ntBASIC10□□□□□ -0.81
Rfx3P48381 Gm12566-201ENSMUST00000121479 359 ntBASIC10□□□□□ -0.81
Rfx3P48381 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC10□□□□□ -0.81
Rfx3P48381 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC10□□□□□ -0.81
Rfx3P48381 Gm24844-201ENSMUST00000158679 127 ntBASIC10□□□□□ -0.81
Rfx3P48381 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC10□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 75.7 ms