Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Timp3P39876 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Timp3P39876 Srp54a-207ENSMUST00000110708 3646 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Timp3P39876 Gm42449-201ENSMUST00000200349 2258 ntBASIC9.14□□□□□ -0.95
Timp3P39876 Gm4900-201ENSMUST00000222046 1628 ntBASIC9.14□□□□□ -0.95
Timp3P39876 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Timp3P39876 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Timp3P39876 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
Timp3P39876 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Timp3P39876 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Timp3P39876 Gm14395-201ENSMUST00000120494 563 ntBASIC9.14□□□□□ -0.95
Timp3P39876 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC9.14□□□□□ -0.95
Timp3P39876 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC9.14□□□□□ -0.95
Timp3P39876 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Timp3P39876 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Timp3P39876 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Timp3P39876 Gm8531-201ENSMUST00000188319 893 ntBASIC9.14□□□□□ -0.95
Timp3P39876 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC9.14□□□□□ -0.95
Timp3P39876 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC9.14□□□□□ -0.95
Timp3P39876 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC9.14□□□□□ -0.95
Timp3P39876 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Timp3P39876 Gm5996-201ENSMUST00000211110 718 ntBASIC9.14□□□□□ -0.95
Timp3P39876 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC9.14□□□□□ -0.95
Timp3P39876 CT009527.1-201ENSMUST00000224205 339 ntBASIC9.14□□□□□ -0.95
Timp3P39876 Gm9873-201ENSMUST00000063891 1097 ntBASIC9.14□□□□□ -0.95
Timp3P39876 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Timp3P39876 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC9.14□□□□□ -0.95
Timp3P39876 n-R5s211-201ENSMUST00000093689 119 ntBASIC9.14□□□□□ -0.95
Timp3P39876 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Timp3P39876 Aebp1-202ENSMUST00000109829 2541 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Timp3P39876 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Timp3P39876 Kif19a-201ENSMUST00000084368 3433 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Timp3P39876 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
Timp3P39876 Dctn1-203ENSMUST00000113913 4163 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Timp3P39876 AC154171.2-201ENSMUST00000225219 2652 ntBASIC9.14□□□□□ -0.95
Timp3P39876 Sptan1-204ENSMUST00000113717 7958 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Timp3P39876 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Timp3P39876 Pnpla6-201ENSMUST00000004681 4438 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Timp3P39876 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Timp3P39876 Olfr463-202ENSMUST00000215150 2031 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Timp3P39876 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Timp3P39876 Gm44190-201ENSMUST00000205083 1401 ntBASIC9.14□□□□□ -0.95
Timp3P39876 Gm19165-201ENSMUST00000204453 1982 ntBASIC9.13□□□□□ -0.95
Timp3P39876 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
Timp3P39876 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Timp3P39876 Snw1-201ENSMUST00000021428 2232 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Timp3P39876 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
Timp3P39876 Grem1-201ENSMUST00000099575 4148 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Timp3P39876 Tnxb-201ENSMUST00000087399 12209 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
Timp3P39876 Gm7841-201ENSMUST00000122108 1629 ntBASIC9.13□□□□□ -0.95
Timp3P39876 Mroh8-202ENSMUST00000143663 3460 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Timp3P39876 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Timp3P39876 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Timp3P39876 Add2-204ENSMUST00000203366 3407 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
Timp3P39876 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
Timp3P39876 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
Timp3P39876 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Timp3P39876 Syn2-202ENSMUST00000169345 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Timp3P39876 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Timp3P39876 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Timp3P39876 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Timp3P39876 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC9.13□□□□□ -0.95
Timp3P39876 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC9.13□□□□□ -0.95
Timp3P39876 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC9.13□□□□□ -0.95
Timp3P39876 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC9.13□□□□□ -0.95
Timp3P39876 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC9.13□□□□□ -0.95
Timp3P39876 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC9.13□□□□□ -0.95
Timp3P39876 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC9.13□□□□□ -0.95
Timp3P39876 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC9.13□□□□□ -0.95
Timp3P39876 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC9.13□□□□□ -0.95
Timp3P39876 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC9.13□□□□□ -0.95
Timp3P39876 Gm8436-201ENSMUST00000210152 1080 ntBASIC9.13□□□□□ -0.95
Timp3P39876 Gm5749-201ENSMUST00000210673 1090 ntBASIC9.13□□□□□ -0.95
Timp3P39876 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC9.13□□□□□ -0.95
Timp3P39876 Olfr335-ps-201ENSMUST00000223545 939 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
Timp3P39876 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
Timp3P39876 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Timp3P39876 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Timp3P39876 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Timp3P39876 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Timp3P39876 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Timp3P39876 Gm43242-201ENSMUST00000199507 1776 ntBASIC9.13□□□□□ -0.95
Timp3P39876 Ift88os-201ENSMUST00000149702 2016 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Timp3P39876 Gm37333-201ENSMUST00000192904 2251 ntBASIC9.13□□□□□ -0.95
Timp3P39876 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC9.13□□□□□ -0.95
Timp3P39876 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
Timp3P39876 Triobp-204ENSMUST00000109690 7023 ntAPPRIS P4 TSL 1 (best) BASIC9.13□□□□□ -0.95
Timp3P39876 Spg20-203ENSMUST00000117341 2957 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Timp3P39876 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Timp3P39876 Gm40617-201ENSMUST00000218840 2420 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Timp3P39876 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC9.13□□□□□ -0.95
Timp3P39876 Calr-201ENSMUST00000003912 2184 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Timp3P39876 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Timp3P39876 Prpf40b-202ENSMUST00000118287 3129 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Timp3P39876 Ccdc96-201ENSMUST00000060100 3585 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
Timp3P39876 Colec12-201ENSMUST00000040069 3322 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Timp3P39876 Thbs2-201ENSMUST00000170872 5922 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Timp3P39876 Acin1-203ENSMUST00000111484 4048 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
Timp3P39876 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Timp3P39876 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms