Protein–RNA interactions for Protein: O54890

Itgb3, Integrin beta-3, mousemouse

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Itgb3O54890 Lsm8-201ENSMUST00000056398 807 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Itgb3O54890 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Itgb3O54890 Gm10334-201ENSMUST00000095999 876 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Itgb3O54890 Prss3-201ENSMUST00000096003 822 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Itgb3O54890 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Itgb3O54890 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Itgb3O54890 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Itgb3O54890 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Itgb3O54890 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Itgb3O54890 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Itgb3O54890 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Itgb3O54890 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Itgb3O54890 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Itgb3O54890 Gm43482-201ENSMUST00000202797 1861 ntBASIC11.74□□□□□ -0.53
Itgb3O54890 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Itgb3O54890 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Itgb3O54890 Gm45206-201ENSMUST00000206885 2285 ntBASIC11.74□□□□□ -0.53
Itgb3O54890 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Itgb3O54890 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC11.73□□□□□ -0.53
Itgb3O54890 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC11.73□□□□□ -0.53
Itgb3O54890 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Itgb3O54890 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Itgb3O54890 Gm25562-201ENSMUST00000104608 133 ntBASIC11.73□□□□□ -0.53
Itgb3O54890 Gsg1-203ENSMUST00000111910 1384 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Itgb3O54890 Gm11560-201ENSMUST00000117567 948 ntBASIC11.73□□□□□ -0.53
Itgb3O54890 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Itgb3O54890 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Itgb3O54890 Gm25830-201ENSMUST00000158923 132 ntBASIC11.73□□□□□ -0.53
Itgb3O54890 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Itgb3O54890 Gm8723-201ENSMUST00000166076 820 ntBASIC11.73□□□□□ -0.53
Itgb3O54890 Gm8701-201ENSMUST00000169259 874 ntBASIC11.73□□□□□ -0.53
Itgb3O54890 Anp32e-206ENSMUST00000169426 915 ntTSL 5 BASIC11.73□□□□□ -0.53
Itgb3O54890 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Itgb3O54890 Dusp3-207ENSMUST00000176261 496 ntTSL 3 BASIC11.73□□□□□ -0.53
Itgb3O54890 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Itgb3O54890 Gm26982-201ENSMUST00000182250 1151 ntBASIC11.73□□□□□ -0.53
Itgb3O54890 Gm37365-201ENSMUST00000193109 409 ntBASIC11.73□□□□□ -0.53
Itgb3O54890 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Itgb3O54890 Gm19166-201ENSMUST00000196041 1063 ntBASIC11.73□□□□□ -0.53
Itgb3O54890 Ceacam9-201ENSMUST00000001984 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Itgb3O54890 BC028471-201ENSMUST00000200937 520 ntTSL 2 BASIC11.73□□□□□ -0.53
Itgb3O54890 Gm44216-201ENSMUST00000203942 157 ntBASIC11.73□□□□□ -0.53
Itgb3O54890 C530044C16Rik-201ENSMUST00000204275 1624 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Itgb3O54890 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC11.73□□□□□ -0.53
Itgb3O54890 Gm45609-206ENSMUST00000210176 1023 ntTSL 5 BASIC11.73□□□□□ -0.53
Itgb3O54890 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Itgb3O54890 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC11.73□□□□□ -0.53
Itgb3O54890 AC165249.1-202ENSMUST00000217990 734 ntTSL 3 BASIC11.73□□□□□ -0.53
Itgb3O54890 Ly86-201ENSMUST00000021860 1134 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Itgb3O54890 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Itgb3O54890 AC123694.1-201ENSMUST00000219525 644 ntTSL 5 BASIC11.73□□□□□ -0.53
Itgb3O54890 AC174797.2-202ENSMUST00000225729 568 ntBASIC11.73□□□□□ -0.53
Itgb3O54890 Capsl-202ENSMUST00000226688 739 ntBASIC11.73□□□□□ -0.53
Itgb3O54890 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Itgb3O54890 Higd2a-201ENSMUST00000026986 648 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Itgb3O54890 Spata46-201ENSMUST00000056991 771 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Itgb3O54890 Mcts2-201ENSMUST00000062148 917 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Itgb3O54890 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Itgb3O54890 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
Itgb3O54890 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Itgb3O54890 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Itgb3O54890 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Itgb3O54890 Gm26686-201ENSMUST00000181951 3467 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Itgb3O54890 Tab1-201ENSMUST00000023050 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Itgb3O54890 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Itgb3O54890 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Itgb3O54890 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC11.73□□□□□ -0.53
Itgb3O54890 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Itgb3O54890 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Itgb3O54890 Nanog-201ENSMUST00000012540 2211 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Itgb3O54890 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Itgb3O54890 Plekhg5-203ENSMUST00000105662 3933 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Itgb3O54890 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Itgb3O54890 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Itgb3O54890 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Itgb3O54890 Gm3642-201ENSMUST00000166895 1762 ntAPPRIS P5 TSL 5 BASIC11.72□□□□□ -0.53
Itgb3O54890 Ceacam1-205ENSMUST00000206171 1722 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Itgb3O54890 Gm17745-201ENSMUST00000212186 1692 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Itgb3O54890 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Itgb3O54890 Ccdc78-201ENSMUST00000095500 1651 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Itgb3O54890 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Itgb3O54890 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Itgb3O54890 Thoc6-202ENSMUST00000095579 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Itgb3O54890 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Itgb3O54890 Gm7278-201ENSMUST00000119836 1401 ntBASIC11.72□□□□□ -0.53
Itgb3O54890 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Itgb3O54890 Rfesd-201ENSMUST00000050997 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Itgb3O54890 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Itgb3O54890 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC11.72□□□□□ -0.53
Itgb3O54890 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Itgb3O54890 Gm2128-201ENSMUST00000108009 2560 ntBASIC11.72□□□□□ -0.53
Itgb3O54890 Scp2-202ENSMUST00000106701 772 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Itgb3O54890 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Itgb3O54890 Gm15486-201ENSMUST00000135147 604 ntTSL 3 BASIC11.72□□□□□ -0.53
Itgb3O54890 Gm12682-201ENSMUST00000144637 1081 ntTSL 5 BASIC11.72□□□□□ -0.53
Itgb3O54890 Gm27191-201ENSMUST00000145973 448 ntTSL 3 BASIC11.72□□□□□ -0.53
Itgb3O54890 Gm22877-201ENSMUST00000175451 105 ntBASIC11.72□□□□□ -0.53
Itgb3O54890 Platr10-202ENSMUST00000191479 818 ntBASIC11.72□□□□□ -0.53
Itgb3O54890 CT025551.1-201ENSMUST00000223996 692 ntBASIC11.72□□□□□ -0.53
Itgb3O54890 AC154184.3-201ENSMUST00000225620 1090 ntBASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 88.4 ms