Protein–RNA interactions for Protein: P31041

Cd28, T-cell-specific surface glycoprotein CD28, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd28P31041 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC9.71□□□□□ -0.86
Cd28P31041 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Cd28P31041 Gm11663-201ENSMUST00000117888 290 ntBASIC9.71□□□□□ -0.86
Cd28P31041 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC9.71□□□□□ -0.86
Cd28P31041 Mup-ps29-201ENSMUST00000122281 202 ntBASIC9.71□□□□□ -0.86
Cd28P31041 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC9.71□□□□□ -0.86
Cd28P31041 Gm24074-201ENSMUST00000158178 260 ntBASIC9.71□□□□□ -0.86
Cd28P31041 Gm10807-201ENSMUST00000177134 795 ntBASIC9.71□□□□□ -0.86
Cd28P31041 Gm25700-201ENSMUST00000177693 110 ntBASIC9.71□□□□□ -0.86
Cd28P31041 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC9.71□□□□□ -0.86
Cd28P31041 Gm38321-201ENSMUST00000195053 235 ntBASIC9.71□□□□□ -0.86
Cd28P31041 AY036118-201ENSMUST00000200021 923 ntBASIC9.71□□□□□ -0.86
Cd28P31041 Gm5302-201ENSMUST00000202130 796 ntBASIC9.71□□□□□ -0.86
Cd28P31041 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC9.71□□□□□ -0.86
Cd28P31041 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Cd28P31041 CT485787.1-201ENSMUST00000225617 968 ntBASIC9.71□□□□□ -0.86
Cd28P31041 AC112945.1-201ENSMUST00000226413 514 ntBASIC9.71□□□□□ -0.86
Cd28P31041 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Cd28P31041 Ctnnd1-223ENSMUST00000111697 5294 ntTSL 5 BASIC9.71□□□□□ -0.86
Cd28P31041 Prph2-201ENSMUST00000024773 2665 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Cd28P31041 Dgcr2-201ENSMUST00000012152 4045 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.86
Cd28P31041 Pax6-225ENSMUST00000167211 2814 ntAPPRIS P3 TSL 5 BASIC9.71□□□□□ -0.86
Cd28P31041 Gm5380-201ENSMUST00000119296 2136 ntBASIC9.71□□□□□ -0.86
Cd28P31041 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Cd28P31041 Oprm1-204ENSMUST00000063036 1427 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Cd28P31041 Tti2-201ENSMUST00000098842 5039 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.86
Cd28P31041 Hmbox1-205ENSMUST00000176128 2958 ntAPPRIS ALT1 TSL 5 BASIC9.71□□□□□ -0.86
Cd28P31041 Ank1-205ENSMUST00000117296 6794 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Cd28P31041 Echdc1-201ENSMUST00000020034 3856 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Cd28P31041 Itgad-202ENSMUST00000106237 4105 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Cd28P31041 Acsm5-205ENSMUST00000207440 2494 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Cd28P31041 Pcdh20-202ENSMUST00000192557 3362 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Cd28P31041 Gm45675-201ENSMUST00000211202 3429 ntBASIC9.7□□□□□ -0.86
Cd28P31041 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Cd28P31041 Pcdh15-207ENSMUST00000124046 5336 ntTSL 5 BASIC9.7□□□□□ -0.86
Cd28P31041 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Cd28P31041 Slco5a1-201ENSMUST00000115402 3690 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
Cd28P31041 Chml-204ENSMUST00000211207 1866 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
Cd28P31041 Nlgn3-201ENSMUST00000065858 8465 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cd28P31041 Pou3f4-201ENSMUST00000078229 2928 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
Cd28P31041 Apobec3-205ENSMUST00000175752 1977 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cd28P31041 Spg20-203ENSMUST00000117341 2957 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Cd28P31041 Chp1-202ENSMUST00000119172 3027 ntTSL 2 BASIC9.7□□□□□ -0.86
Cd28P31041 Il16-203ENSMUST00000145610 3183 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Cd28P31041 Platr4-203ENSMUST00000199155 2161 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Cd28P31041 A930007I19Rik-201ENSMUST00000180737 2319 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Cd28P31041 Osbpl7-206ENSMUST00000168565 3535 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
Cd28P31041 Gm28268-201ENSMUST00000188966 2528 ntTSL 5 BASIC9.7□□□□□ -0.86
Cd28P31041 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC9.7□□□□□ -0.86
Cd28P31041 Gm12247-201ENSMUST00000117585 670 ntBASIC9.7□□□□□ -0.86
Cd28P31041 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cd28P31041 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC9.7□□□□□ -0.86
Cd28P31041 Gm8459-201ENSMUST00000162504 760 ntBASIC9.7□□□□□ -0.86
Cd28P31041 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Cd28P31041 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Cd28P31041 Gm27501-201ENSMUST00000183599 107 ntBASIC9.7□□□□□ -0.86
Cd28P31041 Mir7677-201ENSMUST00000184226 67 ntBASIC9.7□□□□□ -0.86
Cd28P31041 Gm29615-201ENSMUST00000185371 697 ntBASIC9.7□□□□□ -0.86
Cd28P31041 Gm28224-201ENSMUST00000186078 697 ntBASIC9.7□□□□□ -0.86
Cd28P31041 Gm29001-201ENSMUST00000186177 697 ntBASIC9.7□□□□□ -0.86
Cd28P31041 Gm28292-201ENSMUST00000186593 697 ntBASIC9.7□□□□□ -0.86
Cd28P31041 Gm28101-201ENSMUST00000187608 697 ntBASIC9.7□□□□□ -0.86
Cd28P31041 Gm29076-201ENSMUST00000187689 697 ntBASIC9.7□□□□□ -0.86
Cd28P31041 Gm28302-201ENSMUST00000187931 697 ntBASIC9.7□□□□□ -0.86
Cd28P31041 Gm28646-201ENSMUST00000188220 697 ntBASIC9.7□□□□□ -0.86
Cd28P31041 Gm28205-201ENSMUST00000189177 697 ntBASIC9.7□□□□□ -0.86
Cd28P31041 Gm29032-201ENSMUST00000189797 697 ntBASIC9.7□□□□□ -0.86
Cd28P31041 Gm28695-201ENSMUST00000190300 697 ntBASIC9.7□□□□□ -0.86
Cd28P31041 Ighv5-7-201ENSMUST00000192302 244 ntBASIC9.7□□□□□ -0.86
Cd28P31041 Gm37448-201ENSMUST00000192795 697 ntBASIC9.7□□□□□ -0.86
Cd28P31041 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC9.7□□□□□ -0.86
Cd28P31041 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Cd28P31041 AC154461.3-201ENSMUST00000224831 573 ntBASIC9.7□□□□□ -0.86
Cd28P31041 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cd28P31041 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cd28P31041 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cd28P31041 C330027C09Rik-202ENSMUST00000117994 3977 ntTSL 5 BASIC9.7□□□□□ -0.86
Cd28P31041 C330027C09Rik-201ENSMUST00000048374 3974 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cd28P31041 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cd28P31041 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cd28P31041 Elovl5-201ENSMUST00000034904 2782 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cd28P31041 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Cd28P31041 Nos1ap-203ENSMUST00000160466 1533 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Cd28P31041 Tro-201ENSMUST00000087253 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cd28P31041 Pop1-202ENSMUST00000079028 3275 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cd28P31041 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cd28P31041 Myom2-201ENSMUST00000033842 5075 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cd28P31041 Adamts9-205ENSMUST00000167391 6033 ntTSL 5 BASIC9.7□□□□□ -0.86
Cd28P31041 Wipf1-203ENSMUST00000102680 4032 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cd28P31041 Ptpre-205ENSMUST00000210833 2209 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cd28P31041 Dido1-204ENSMUST00000103055 4613 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Cd28P31041 Nol8-209ENSMUST00000223467 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cd28P31041 Mei4-203ENSMUST00000189832 2578 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Cd28P31041 Lin54-209ENSMUST00000152387 2760 ntTSL 5 BASIC9.69□□□□□ -0.86
Cd28P31041 Mdm1-203ENSMUST00000164077 2922 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Cd28P31041 March10-204ENSMUST00000138977 2979 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Cd28P31041 Mefv-202ENSMUST00000100222 3249 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Cd28P31041 Ttc7b-206ENSMUST00000223020 3307 ntTSL 5 BASIC9.69□□□□□ -0.86
Cd28P31041 Arhgap24-203ENSMUST00000094559 3346 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Cd28P31041 Shank2-205ENSMUST00000146006 7666 ntTSL 2 BASIC9.69□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 87.5 ms