Protein–RNA interactions for Protein: Q91XY2

Pcdhga6, Protocadherin gamma A6, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga6Q91XY2 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdhga6Q91XY2 Tprkb-204ENSMUST00000113752 749 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Pcdhga6Q91XY2 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC11.17□□□□□ -0.62
Pcdhga6Q91XY2 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC11.17□□□□□ -0.62
Pcdhga6Q91XY2 Gm13026-201ENSMUST00000140113 608 ntTSL 5 BASIC11.17□□□□□ -0.62
Pcdhga6Q91XY2 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdhga6Q91XY2 Gm25554-201ENSMUST00000158075 113 ntBASIC11.17□□□□□ -0.62
Pcdhga6Q91XY2 Gm16030-201ENSMUST00000159098 603 ntBASIC11.17□□□□□ -0.62
Pcdhga6Q91XY2 Gm7069-201ENSMUST00000182418 1008 ntBASIC11.17□□□□□ -0.62
Pcdhga6Q91XY2 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC11.17□□□□□ -0.62
Pcdhga6Q91XY2 Nmbr-207ENSMUST00000190751 921 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdhga6Q91XY2 Tcf25-210ENSMUST00000212880 827 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdhga6Q91XY2 Rps2-ps12-201ENSMUST00000214262 785 ntBASIC11.17□□□□□ -0.62
Pcdhga6Q91XY2 AC164087.2-201ENSMUST00000216206 1072 ntBASIC11.17□□□□□ -0.62
Pcdhga6Q91XY2 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC11.17□□□□□ -0.62
Pcdhga6Q91XY2 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdhga6Q91XY2 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC11.17□□□□□ -0.62
Pcdhga6Q91XY2 Tex101-201ENSMUST00000078001 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdhga6Q91XY2 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC11.17□□□□□ -0.62
Pcdhga6Q91XY2 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdhga6Q91XY2 Cast-212ENSMUST00000223309 1529 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdhga6Q91XY2 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC11.17□□□□□ -0.62
Pcdhga6Q91XY2 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdhga6Q91XY2 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdhga6Q91XY2 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdhga6Q91XY2 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdhga6Q91XY2 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdhga6Q91XY2 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdhga6Q91XY2 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC11.16□□□□□ -0.62
Pcdhga6Q91XY2 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdhga6Q91XY2 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdhga6Q91XY2 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdhga6Q91XY2 Gm43064-201ENSMUST00000199710 3144 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
Pcdhga6Q91XY2 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdhga6Q91XY2 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdhga6Q91XY2 Fam114a2-202ENSMUST00000108850 1765 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdhga6Q91XY2 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdhga6Q91XY2 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdhga6Q91XY2 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC11.16□□□□□ -0.62
Pcdhga6Q91XY2 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdhga6Q91XY2 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC11.16□□□□□ -0.62
Pcdhga6Q91XY2 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Pcdhga6Q91XY2 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdhga6Q91XY2 Gm23255-201ENSMUST00000102244 110 ntBASIC11.16□□□□□ -0.62
Pcdhga6Q91XY2 Gm23612-201ENSMUST00000103823 110 ntBASIC11.16□□□□□ -0.62
Pcdhga6Q91XY2 Gm24279-201ENSMUST00000104236 131 ntBASIC11.16□□□□□ -0.62
Pcdhga6Q91XY2 1700011M02Rik-201ENSMUST00000113602 420 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdhga6Q91XY2 Fmr1nb-203ENSMUST00000114647 679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdhga6Q91XY2 Gm12247-201ENSMUST00000117585 670 ntBASIC11.16□□□□□ -0.62
Pcdhga6Q91XY2 Gm16219-201ENSMUST00000120096 274 ntBASIC11.16□□□□□ -0.62
Pcdhga6Q91XY2 Gm14395-201ENSMUST00000120494 563 ntBASIC11.16□□□□□ -0.62
Pcdhga6Q91XY2 Kdm6bos-201ENSMUST00000129924 840 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdhga6Q91XY2 Zfp961-203ENSMUST00000132848 781 ntTSL 5 BASIC11.16□□□□□ -0.62
Pcdhga6Q91XY2 Gm17709-201ENSMUST00000174536 1096 ntBASIC11.16□□□□□ -0.62
Pcdhga6Q91XY2 Gm23576-201ENSMUST00000179918 110 ntBASIC11.16□□□□□ -0.62
Pcdhga6Q91XY2 Gm27390-201ENSMUST00000184516 176 ntBASIC11.16□□□□□ -0.62
Pcdhga6Q91XY2 Gm43547-201ENSMUST00000197729 328 ntBASIC11.16□□□□□ -0.62
Pcdhga6Q91XY2 Gm7504-201ENSMUST00000201449 424 ntBASIC11.16□□□□□ -0.62
Pcdhga6Q91XY2 Gm45094-201ENSMUST00000207013 617 ntBASIC11.16□□□□□ -0.62
Pcdhga6Q91XY2 Bcl2l12-205ENSMUST00000207755 605 ntAPPRIS ALT2 TSL 2 BASIC11.16□□□□□ -0.62
Pcdhga6Q91XY2 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC11.16□□□□□ -0.62
Pcdhga6Q91XY2 Gm2594-201ENSMUST00000214774 742 ntBASIC11.16□□□□□ -0.62
Pcdhga6Q91XY2 Gm2696-202ENSMUST00000220393 684 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Pcdhga6Q91XY2 CT573047.1-201ENSMUST00000223652 851 ntBASIC11.16□□□□□ -0.62
Pcdhga6Q91XY2 1810013D15Rik-201ENSMUST00000029827 300 ntTSL 5 BASIC11.16□□□□□ -0.62
Pcdhga6Q91XY2 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdhga6Q91XY2 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdhga6Q91XY2 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdhga6Q91XY2 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdhga6Q91XY2 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdhga6Q91XY2 Ptpro-201ENSMUST00000077115 5049 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdhga6Q91XY2 Gpr101-201ENSMUST00000057645 5410 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdhga6Q91XY2 Clip1-204ENSMUST00000111564 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdhga6Q91XY2 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdhga6Q91XY2 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdhga6Q91XY2 Pdgfra-202ENSMUST00000168162 6834 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdhga6Q91XY2 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdhga6Q91XY2 Phf24-203ENSMUST00000107976 6538 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdhga6Q91XY2 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdhga6Q91XY2 Dock6-207ENSMUST00000217336 6880 ntAPPRIS P2 TSL 5 BASIC11.16□□□□□ -0.62
Pcdhga6Q91XY2 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pcdhga6Q91XY2 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pcdhga6Q91XY2 Gm37600-201ENSMUST00000193764 3292 ntBASIC11.15□□□□□ -0.62
Pcdhga6Q91XY2 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Pcdhga6Q91XY2 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pcdhga6Q91XY2 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pcdhga6Q91XY2 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC11.15□□□□□ -0.62
Pcdhga6Q91XY2 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC11.15□□□□□ -0.62
Pcdhga6Q91XY2 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pcdhga6Q91XY2 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pcdhga6Q91XY2 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pcdhga6Q91XY2 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Pcdhga6Q91XY2 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pcdhga6Q91XY2 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC11.15□□□□□ -0.62
Pcdhga6Q91XY2 Myh11-201ENSMUST00000090287 6632 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pcdhga6Q91XY2 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pcdhga6Q91XY2 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC11.15□□□□□ -0.62
Pcdhga6Q91XY2 Gm21759-201ENSMUST00000178345 1828 ntBASIC11.15□□□□□ -0.62
Pcdhga6Q91XY2 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC11.15□□□□□ -0.62
Pcdhga6Q91XY2 Fas-202ENSMUST00000112472 555 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms