Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Gm43249-201ENSMUST00000200464 458 ntBASIC11.27□□□□□ -0.61
Sh3rf2Q8BZT2 4930447C11Rik-201ENSMUST00000204503 928 ntBASIC11.27□□□□□ -0.61
Sh3rf2Q8BZT2 Gm4903-201ENSMUST00000210462 405 ntBASIC11.27□□□□□ -0.61
Sh3rf2Q8BZT2 Gm4924-205ENSMUST00000211099 490 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Sh3rf2Q8BZT2 Gm30978-201ENSMUST00000211581 1066 ntTSL 5 BASIC11.27□□□□□ -0.61
Sh3rf2Q8BZT2 Gm45500-201ENSMUST00000211676 803 ntBASIC11.27□□□□□ -0.61
Sh3rf2Q8BZT2 Tcf25-210ENSMUST00000212880 827 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Sh3rf2Q8BZT2 Gm40639-201ENSMUST00000214642 625 ntTSL 5 BASIC11.27□□□□□ -0.61
Sh3rf2Q8BZT2 Gm46224-201ENSMUST00000220221 1242 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Sh3rf2Q8BZT2 Eif4ebp3-201ENSMUST00000036765 744 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sh3rf2Q8BZT2 Banf2-201ENSMUST00000037722 571 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sh3rf2Q8BZT2 Rnf181-202ENSMUST00000069595 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sh3rf2Q8BZT2 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sh3rf2Q8BZT2 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sh3rf2Q8BZT2 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Sh3rf2Q8BZT2 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sh3rf2Q8BZT2 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sh3rf2Q8BZT2 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sh3rf2Q8BZT2 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sh3rf2Q8BZT2 Tmem39a-204ENSMUST00000163884 1645 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sh3rf2Q8BZT2 Zmat1-201ENSMUST00000064659 3501 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sh3rf2Q8BZT2 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sh3rf2Q8BZT2 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Sh3rf2Q8BZT2 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Sh3rf2Q8BZT2 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sh3rf2Q8BZT2 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sh3rf2Q8BZT2 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sh3rf2Q8BZT2 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sh3rf2Q8BZT2 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Sh3rf2Q8BZT2 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sh3rf2Q8BZT2 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC11.26□□□□□ -0.61
Sh3rf2Q8BZT2 Tpp2-201ENSMUST00000087933 4649 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Sh3rf2Q8BZT2 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sh3rf2Q8BZT2 Glb1l-201ENSMUST00000113623 2339 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Sh3rf2Q8BZT2 Ppp2r2cos-201ENSMUST00000152862 1491 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Sh3rf2Q8BZT2 Slc13a5-206ENSMUST00000208912 1751 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Sh3rf2Q8BZT2 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC11.26□□□□□ -0.61
Sh3rf2Q8BZT2 Gm18210-201ENSMUST00000209001 1524 ntBASIC11.26□□□□□ -0.61
Sh3rf2Q8BZT2 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sh3rf2Q8BZT2 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sh3rf2Q8BZT2 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sh3rf2Q8BZT2 Scp2-202ENSMUST00000106701 772 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Sh3rf2Q8BZT2 Rpl15-204ENSMUST00000112598 802 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sh3rf2Q8BZT2 Gm13019-201ENSMUST00000120000 276 ntBASIC11.26□□□□□ -0.61
Sh3rf2Q8BZT2 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC11.26□□□□□ -0.61
Sh3rf2Q8BZT2 Gm15569-201ENSMUST00000133675 594 ntTSL 3 BASIC11.26□□□□□ -0.61
Sh3rf2Q8BZT2 Gm13026-201ENSMUST00000140113 608 ntTSL 5 BASIC11.26□□□□□ -0.61
Sh3rf2Q8BZT2 Polr3c-205ENSMUST00000141377 808 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Sh3rf2Q8BZT2 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Sh3rf2Q8BZT2 Gm26119-201ENSMUST00000175601 104 ntBASIC11.26□□□□□ -0.61
Sh3rf2Q8BZT2 Sbsn-205ENSMUST00000182721 677 ntAPPRIS ALT2 TSL 3 BASIC11.26□□□□□ -0.61
Sh3rf2Q8BZT2 Gm5621-201ENSMUST00000187303 640 ntBASIC11.26□□□□□ -0.61
Sh3rf2Q8BZT2 Gm29083-201ENSMUST00000189205 733 ntTSL 3 BASIC11.26□□□□□ -0.61
Sh3rf2Q8BZT2 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
Sh3rf2Q8BZT2 AC159376.1-201ENSMUST00000218504 630 ntBASIC11.26□□□□□ -0.61
Sh3rf2Q8BZT2 Prss51-204ENSMUST00000224112 1042 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Sh3rf2Q8BZT2 Cxcl1-201ENSMUST00000031327 953 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sh3rf2Q8BZT2 Rpl10-ps3-201ENSMUST00000076364 768 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Sh3rf2Q8BZT2 Gm7589-201ENSMUST00000085631 534 ntBASIC11.26□□□□□ -0.61
Sh3rf2Q8BZT2 Gm8325-201ENSMUST00000099086 453 ntBASIC11.26□□□□□ -0.61
Sh3rf2Q8BZT2 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sh3rf2Q8BZT2 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sh3rf2Q8BZT2 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sh3rf2Q8BZT2 Cops3-201ENSMUST00000019517 1646 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sh3rf2Q8BZT2 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sh3rf2Q8BZT2 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sh3rf2Q8BZT2 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sh3rf2Q8BZT2 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Sh3rf2Q8BZT2 Gm7964-201ENSMUST00000051522 1378 ntBASIC11.26□□□□□ -0.61
Sh3rf2Q8BZT2 Slc10a1-202ENSMUST00000218162 1749 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sh3rf2Q8BZT2 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Sh3rf2Q8BZT2 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC11.26□□□□□ -0.61
Sh3rf2Q8BZT2 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sh3rf2Q8BZT2 Prrx1-201ENSMUST00000027878 4952 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sh3rf2Q8BZT2 Nr1i3-201ENSMUST00000005820 1414 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sh3rf2Q8BZT2 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC11.26□□□□□ -0.61
Sh3rf2Q8BZT2 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC11.26□□□□□ -0.61
Sh3rf2Q8BZT2 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sh3rf2Q8BZT2 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sh3rf2Q8BZT2 Ppp1r32-201ENSMUST00000038842 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sh3rf2Q8BZT2 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sh3rf2Q8BZT2 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Sh3rf2Q8BZT2 Schip1-202ENSMUST00000169909 1517 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Sh3rf2Q8BZT2 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC11.25□□□□□ -0.61
Sh3rf2Q8BZT2 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Sh3rf2Q8BZT2 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sh3rf2Q8BZT2 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sh3rf2Q8BZT2 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Sh3rf2Q8BZT2 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sh3rf2Q8BZT2 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sh3rf2Q8BZT2 AC174797.1-201ENSMUST00000224339 1649 ntBASIC11.25□□□□□ -0.61
Sh3rf2Q8BZT2 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Sh3rf2Q8BZT2 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Sh3rf2Q8BZT2 Gm17745-201ENSMUST00000212186 1692 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Sh3rf2Q8BZT2 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Sh3rf2Q8BZT2 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sh3rf2Q8BZT2 Rpl10-ps1-201ENSMUST00000119438 645 ntBASIC11.25□□□□□ -0.61
Sh3rf2Q8BZT2 AU015836-201ENSMUST00000120624 674 ntTSL 3 BASIC11.25□□□□□ -0.61
Sh3rf2Q8BZT2 Gm13572-201ENSMUST00000153675 559 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Sh3rf2Q8BZT2 Anp32e-206ENSMUST00000169426 915 ntTSL 5 BASIC11.25□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms