Protein–RNA interactions for Protein: Q3US59

Gm28047, Predicted gene, 28047, mousemouse

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28047Q3US59 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Gm28047Q3US59 Pex13-201ENSMUST00000020523 4146 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gm28047Q3US59 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gm28047Q3US59 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gm28047Q3US59 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Gm28047Q3US59 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gm28047Q3US59 Cldn19-202ENSMUST00000094823 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gm28047Q3US59 Gm13422-201ENSMUST00000118834 504 ntBASIC12.63□□□□□ -0.39
Gm28047Q3US59 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC12.63□□□□□ -0.39
Gm28047Q3US59 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Gm28047Q3US59 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Gm28047Q3US59 Gm28746-201ENSMUST00000187453 380 ntBASIC12.63□□□□□ -0.39
Gm28047Q3US59 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Gm28047Q3US59 Gm38321-201ENSMUST00000195053 235 ntBASIC12.63□□□□□ -0.39
Gm28047Q3US59 AC073947.1-201ENSMUST00000216991 649 ntBASIC12.63□□□□□ -0.39
Gm28047Q3US59 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Gm28047Q3US59 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Gm28047Q3US59 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC12.63□□□□□ -0.39
Gm28047Q3US59 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Gm28047Q3US59 Gm15883-201ENSMUST00000153562 1690 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Gm28047Q3US59 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Gm28047Q3US59 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Gm28047Q3US59 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC12.63□□□□□ -0.39
Gm28047Q3US59 Tasp1-203ENSMUST00000110079 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gm28047Q3US59 Gm42641-202ENSMUST00000160217 4248 ntAPPRIS P5 TSL 2 BASIC12.63□□□□□ -0.39
Gm28047Q3US59 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm28047Q3US59 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm28047Q3US59 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm28047Q3US59 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Gm28047Q3US59 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Gm28047Q3US59 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Gm28047Q3US59 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Gm28047Q3US59 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm28047Q3US59 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
Gm28047Q3US59 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm28047Q3US59 Tcp10a-203ENSMUST00000129709 1778 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm28047Q3US59 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC12.62□□□□□ -0.39
Gm28047Q3US59 1810053B23Rik-205ENSMUST00000188056 1592 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Gm28047Q3US59 Zcwpw2-202ENSMUST00000187329 1469 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Gm28047Q3US59 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm28047Q3US59 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Gm28047Q3US59 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm28047Q3US59 Gm15573-201ENSMUST00000119487 540 ntBASIC12.62□□□□□ -0.39
Gm28047Q3US59 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC12.62□□□□□ -0.39
Gm28047Q3US59 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC12.62□□□□□ -0.39
Gm28047Q3US59 Gm16570-201ENSMUST00000161951 436 ntBASIC12.62□□□□□ -0.39
Gm28047Q3US59 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Gm28047Q3US59 Gm37826-201ENSMUST00000195329 322 ntBASIC12.62□□□□□ -0.39
Gm28047Q3US59 Gm44323-201ENSMUST00000198689 129 ntBASIC12.62□□□□□ -0.39
Gm28047Q3US59 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
Gm28047Q3US59 CT010506.1-201ENSMUST00000223673 349 ntBASIC12.62□□□□□ -0.39
Gm28047Q3US59 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm28047Q3US59 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Gm28047Q3US59 Galm-201ENSMUST00000039205 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm28047Q3US59 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Gm28047Q3US59 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm28047Q3US59 Stk38-201ENSMUST00000009138 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm28047Q3US59 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm28047Q3US59 Chmp1b-202ENSMUST00000210564 2490 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Gm28047Q3US59 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm28047Q3US59 Zswim9-201ENSMUST00000108532 3346 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Gm28047Q3US59 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm28047Q3US59 Gm9387-201ENSMUST00000098624 1320 ntBASIC12.62□□□□□ -0.39
Gm28047Q3US59 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gm28047Q3US59 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gm28047Q3US59 Abi1-206ENSMUST00000126112 3360 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gm28047Q3US59 Filip1l-202ENSMUST00000159414 3253 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Gm28047Q3US59 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gm28047Q3US59 Dpf2-202ENSMUST00000118623 2406 ntTSL 5 BASIC12.61□□□□□ -0.39
Gm28047Q3US59 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gm28047Q3US59 Mpp4-203ENSMUST00000114275 2982 ntAPPRIS P4 TSL 2 BASIC12.61□□□□□ -0.39
Gm28047Q3US59 Pde6c-202ENSMUST00000112329 2895 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Gm28047Q3US59 Mamdc2-201ENSMUST00000036069 3338 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gm28047Q3US59 Immt-206ENSMUST00000166975 2469 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Gm28047Q3US59 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gm28047Q3US59 Nf2-202ENSMUST00000056290 2394 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gm28047Q3US59 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gm28047Q3US59 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Gm28047Q3US59 Igkv3-10-201ENSMUST00000103397 356 ntAPPRIS ALT2 BASIC12.61□□□□□ -0.39
Gm28047Q3US59 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gm28047Q3US59 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gm28047Q3US59 Mir5120-201ENSMUST00000175020 78 ntBASIC12.61□□□□□ -0.39
Gm28047Q3US59 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Gm28047Q3US59 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC12.61□□□□□ -0.39
Gm28047Q3US59 Gm29283-201ENSMUST00000187394 288 ntTSL 5 BASIC12.61□□□□□ -0.39
Gm28047Q3US59 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Gm28047Q3US59 AC159747.1-201ENSMUST00000219903 265 ntBASIC12.61□□□□□ -0.39
Gm28047Q3US59 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Gm28047Q3US59 AC154589.2-201ENSMUST00000228847 251 ntBASIC12.61□□□□□ -0.39
Gm28047Q3US59 Slc10a1-202ENSMUST00000218162 1749 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gm28047Q3US59 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gm28047Q3US59 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gm28047Q3US59 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gm28047Q3US59 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC12.61□□□□□ -0.39
Gm28047Q3US59 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gm28047Q3US59 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
Gm28047Q3US59 Gm5766-201ENSMUST00000160520 1977 ntBASIC12.61□□□□□ -0.39
Gm28047Q3US59 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Gm28047Q3US59 Fam47e-202ENSMUST00000131166 1500 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Gm28047Q3US59 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms