Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Tpm1P58771 Gm18038-201ENSMUST00000197900 485 ntBASIC12.37□□□□□ -0.43
Tpm1P58771 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Tpm1P58771 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC12.37□□□□□ -0.43
Tpm1P58771 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC12.37□□□□□ -0.43
Tpm1P58771 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Tpm1P58771 Gm6722-201ENSMUST00000221586 390 ntBASIC12.37□□□□□ -0.43
Tpm1P58771 AC122371.3-201ENSMUST00000223402 1061 ntBASIC12.37□□□□□ -0.43
Tpm1P58771 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC12.37□□□□□ -0.43
Tpm1P58771 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tpm1P58771 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Tpm1P58771 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Tpm1P58771 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Tpm1P58771 Dhcr7-211ENSMUST00000207143 1652 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Tpm1P58771 F730311O21Rik-201ENSMUST00000189288 5447 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Tpm1P58771 Qars-203ENSMUST00000134939 2374 ntTSL 5 BASIC12.37□□□□□ -0.43
Tpm1P58771 Sox13-203ENSMUST00000144386 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tpm1P58771 Nos3-202ENSMUST00000115090 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tpm1P58771 Aldh1a3-201ENSMUST00000015278 3443 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tpm1P58771 Ank1-206ENSMUST00000117662 6257 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tpm1P58771 Rnf216-201ENSMUST00000053498 4474 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tpm1P58771 Aqr-202ENSMUST00000102543 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tpm1P58771 Fam13c-201ENSMUST00000062883 3262 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tpm1P58771 Rasgrp4-213ENSMUST00000204845 3182 ntTSL 5 BASIC12.36□□□□□ -0.43
Tpm1P58771 Slc1a2-202ENSMUST00000080210 11595 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tpm1P58771 Ubr1-201ENSMUST00000028728 7768 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tpm1P58771 1600014C10Rik-202ENSMUST00000165308 3335 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Tpm1P58771 1600014C10Rik-204ENSMUST00000178207 3341 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Tpm1P58771 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tpm1P58771 Slc6a5-203ENSMUST00000207753 6966 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tpm1P58771 Gm45041-201ENSMUST00000207366 3108 ntBASIC12.36□□□□□ -0.43
Tpm1P58771 Ptbp3-201ENSMUST00000030076 6855 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tpm1P58771 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Tpm1P58771 Ribc2-201ENSMUST00000023067 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tpm1P58771 4933409D19Rik-201ENSMUST00000193674 1557 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Tpm1P58771 Gm6015-201ENSMUST00000217493 1586 ntBASIC12.36□□□□□ -0.43
Tpm1P58771 Gm19972-201ENSMUST00000218180 5664 ntBASIC12.36□□□□□ -0.43
Tpm1P58771 AC131068.2-201ENSMUST00000226175 1453 ntBASIC12.36□□□□□ -0.43
Tpm1P58771 Gm5380-201ENSMUST00000119296 2136 ntBASIC12.36□□□□□ -0.43
Tpm1P58771 Gm8815-201ENSMUST00000173809 620 ntBASIC12.36□□□□□ -0.43
Tpm1P58771 Gm10807-201ENSMUST00000177134 795 ntBASIC12.36□□□□□ -0.43
Tpm1P58771 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Tpm1P58771 AY702102-202ENSMUST00000194651 1173 ntBASIC12.36□□□□□ -0.43
Tpm1P58771 Gm38151-201ENSMUST00000195085 289 ntBASIC12.36□□□□□ -0.43
Tpm1P58771 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Tpm1P58771 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC12.36□□□□□ -0.43
Tpm1P58771 Gm13097-201ENSMUST00000210722 397 ntBASIC12.36□□□□□ -0.43
Tpm1P58771 Gm45856-201ENSMUST00000212752 416 ntBASIC12.36□□□□□ -0.43
Tpm1P58771 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC12.36□□□□□ -0.43
Tpm1P58771 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Tpm1P58771 Inpp4a-202ENSMUST00000058307 2963 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Tpm1P58771 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Tpm1P58771 Pcdhb19-201ENSMUST00000059571 7138 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Tpm1P58771 Ano1-202ENSMUST00000118556 4566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tpm1P58771 Plxna3-201ENSMUST00000004326 6943 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tpm1P58771 Exo1-201ENSMUST00000039725 7796 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tpm1P58771 Aen-203ENSMUST00000107425 4956 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tpm1P58771 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tpm1P58771 Clasp1-208ENSMUST00000187713 5367 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Tpm1P58771 Trak2-201ENSMUST00000027186 6189 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tpm1P58771 Tom1l2-203ENSMUST00000093048 4864 ntTSL 5 BASIC12.36□□□□□ -0.43
Tpm1P58771 Wnk1-204ENSMUST00000088646 8364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tpm1P58771 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tpm1P58771 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tpm1P58771 Arhgap6-204ENSMUST00000112129 2487 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Tpm1P58771 Gm38357-201ENSMUST00000195382 2464 ntBASIC12.35□□□□□ -0.43
Tpm1P58771 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tpm1P58771 Sh3rf2-201ENSMUST00000072008 5092 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tpm1P58771 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tpm1P58771 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tpm1P58771 Arhgap24-203ENSMUST00000094559 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tpm1P58771 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC12.35□□□□□ -0.43
Tpm1P58771 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Tpm1P58771 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Tpm1P58771 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tpm1P58771 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Tpm1P58771 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tpm1P58771 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC12.35□□□□□ -0.43
Tpm1P58771 Gm13665-201ENSMUST00000120830 528 ntBASIC12.35□□□□□ -0.43
Tpm1P58771 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC12.35□□□□□ -0.43
Tpm1P58771 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Tpm1P58771 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Tpm1P58771 Gm5745-201ENSMUST00000183748 313 ntBASIC12.35□□□□□ -0.43
Tpm1P58771 Gm42867-201ENSMUST00000202995 469 ntBASIC12.35□□□□□ -0.43
Tpm1P58771 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Tpm1P58771 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC12.35□□□□□ -0.43
Tpm1P58771 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Tpm1P58771 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Tpm1P58771 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Tpm1P58771 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC12.35□□□□□ -0.43
Tpm1P58771 CT485787.1-201ENSMUST00000225617 968 ntBASIC12.35□□□□□ -0.43
Tpm1P58771 Gm10478-201ENSMUST00000084451 396 ntBASIC12.35□□□□□ -0.43
Tpm1P58771 1500012K07Rik-201ENSMUST00000181846 2345 ntTSL 5 BASIC12.35□□□□□ -0.43
Tpm1P58771 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tpm1P58771 Scamp1-203ENSMUST00000152555 1877 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Tpm1P58771 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tpm1P58771 Pde6c-202ENSMUST00000112329 2895 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Tpm1P58771 Git1-202ENSMUST00000100812 3476 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Tpm1P58771 Olfr1219-204ENSMUST00000215225 5865 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Tpm1P58771 Hmgcll1-201ENSMUST00000008052 3737 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 100 ms