Protein–RNA interactions for Protein: B2RUQ2

Usf3, Gene model 608, (NCBI), mousemouse

Predictions only

Length 2,221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf3B2RUQ2 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC9.32□□□□□ -0.92
Usf3B2RUQ2 Gm13267-201ENSMUST00000142787 698 ntTSL 3 BASIC9.32□□□□□ -0.92
Usf3B2RUQ2 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC9.32□□□□□ -0.92
Usf3B2RUQ2 Gm24398-201ENSMUST00000157870 109 ntBASIC9.32□□□□□ -0.92
Usf3B2RUQ2 Fkbp6-204ENSMUST00000201791 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Usf3B2RUQ2 Gm3726-201ENSMUST00000203110 785 ntBASIC9.32□□□□□ -0.92
Usf3B2RUQ2 Gm30671-201ENSMUST00000214898 318 ntBASIC9.32□□□□□ -0.92
Usf3B2RUQ2 BC106175-202ENSMUST00000219344 1213 ntBASIC9.32□□□□□ -0.92
Usf3B2RUQ2 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC9.32□□□□□ -0.92
Usf3B2RUQ2 Gm5451-201ENSMUST00000080545 579 ntBASIC9.32□□□□□ -0.92
Usf3B2RUQ2 Gm23680-201ENSMUST00000083162 164 ntBASIC9.32□□□□□ -0.92
Usf3B2RUQ2 Gm23105-201ENSMUST00000083719 134 ntBASIC9.32□□□□□ -0.92
Usf3B2RUQ2 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Usf3B2RUQ2 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Usf3B2RUQ2 Ift88-201ENSMUST00000122063 3088 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Usf3B2RUQ2 Dzip1l-203ENSMUST00000112885 4350 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
Usf3B2RUQ2 Dzip1l-204ENSMUST00000112886 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Usf3B2RUQ2 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Usf3B2RUQ2 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Usf3B2RUQ2 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Usf3B2RUQ2 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Usf3B2RUQ2 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Usf3B2RUQ2 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Usf3B2RUQ2 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Usf3B2RUQ2 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Usf3B2RUQ2 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Usf3B2RUQ2 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Usf3B2RUQ2 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC9.31□□□□□ -0.92
Usf3B2RUQ2 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Usf3B2RUQ2 Gfra2-201ENSMUST00000022699 3472 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Usf3B2RUQ2 Gcg-201ENSMUST00000102733 1088 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Usf3B2RUQ2 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC9.31□□□□□ -0.92
Usf3B2RUQ2 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC9.31□□□□□ -0.92
Usf3B2RUQ2 Gm29164-201ENSMUST00000185454 1024 ntBASIC9.31□□□□□ -0.92
Usf3B2RUQ2 Gm45592-201ENSMUST00000209605 1043 ntBASIC9.31□□□□□ -0.92
Usf3B2RUQ2 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Usf3B2RUQ2 AC113282.2-201ENSMUST00000224012 945 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
Usf3B2RUQ2 AC113282.3-201ENSMUST00000224757 942 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
Usf3B2RUQ2 AC164618.2-201ENSMUST00000224770 573 ntBASIC9.31□□□□□ -0.92
Usf3B2RUQ2 4930555K19Rik-201ENSMUST00000060066 171 ntBASIC9.31□□□□□ -0.92
Usf3B2RUQ2 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Usf3B2RUQ2 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Usf3B2RUQ2 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Usf3B2RUQ2 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Usf3B2RUQ2 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Usf3B2RUQ2 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Usf3B2RUQ2 Angptl2-201ENSMUST00000004208 3339 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Usf3B2RUQ2 Synpo2l-201ENSMUST00000057090 4394 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Usf3B2RUQ2 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC9.31□□□□□ -0.92
Usf3B2RUQ2 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC9.31□□□□□ -0.92
Usf3B2RUQ2 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC9.31□□□□□ -0.92
Usf3B2RUQ2 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
Usf3B2RUQ2 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Usf3B2RUQ2 Rnf40-201ENSMUST00000033088 3906 ntTSL 5 BASIC9.31□□□□□ -0.92
Usf3B2RUQ2 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Usf3B2RUQ2 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
Usf3B2RUQ2 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Usf3B2RUQ2 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Usf3B2RUQ2 Ntrk2-207ENSMUST00000225488 4706 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
Usf3B2RUQ2 Bmp4-202ENSMUST00000100676 1633 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Usf3B2RUQ2 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Usf3B2RUQ2 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC9.31□□□□□ -0.92
Usf3B2RUQ2 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
Usf3B2RUQ2 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
Usf3B2RUQ2 Gm15615-201ENSMUST00000118876 198 ntBASIC9.31□□□□□ -0.92
Usf3B2RUQ2 Gm20414-201ENSMUST00000172918 646 ntBASIC9.31□□□□□ -0.92
Usf3B2RUQ2 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
Usf3B2RUQ2 Ighv1-86-201ENSMUST00000200562 353 ntBASIC9.31□□□□□ -0.92
Usf3B2RUQ2 AI839979-201ENSMUST00000200738 654 ntTSL 2 BASIC9.31□□□□□ -0.92
Usf3B2RUQ2 Gm43966-201ENSMUST00000203301 612 ntBASIC9.31□□□□□ -0.92
Usf3B2RUQ2 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Usf3B2RUQ2 CT010486.3-201ENSMUST00000224555 811 ntBASIC9.31□□□□□ -0.92
Usf3B2RUQ2 Fam83a-201ENSMUST00000050374 1189 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Usf3B2RUQ2 Rps10-ps1-201ENSMUST00000074353 495 ntBASIC9.31□□□□□ -0.92
Usf3B2RUQ2 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC9.31□□□□□ -0.92
Usf3B2RUQ2 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Usf3B2RUQ2 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Usf3B2RUQ2 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Usf3B2RUQ2 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Usf3B2RUQ2 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Usf3B2RUQ2 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Usf3B2RUQ2 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC9.31□□□□□ -0.92
Usf3B2RUQ2 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Usf3B2RUQ2 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Usf3B2RUQ2 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC9.3□□□□□ -0.92
Usf3B2RUQ2 Il1f5-205ENSMUST00000147885 1392 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Usf3B2RUQ2 Gm6170-201ENSMUST00000187672 1388 ntBASIC9.3□□□□□ -0.92
Usf3B2RUQ2 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC9.3□□□□□ -0.92
Usf3B2RUQ2 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Usf3B2RUQ2 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Usf3B2RUQ2 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Usf3B2RUQ2 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Usf3B2RUQ2 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Usf3B2RUQ2 Fnbp1l-201ENSMUST00000162409 5198 ntTSL 5 BASIC9.3□□□□□ -0.92
Usf3B2RUQ2 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
Usf3B2RUQ2 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Usf3B2RUQ2 Zfp606-202ENSMUST00000123589 3509 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Usf3B2RUQ2 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Usf3B2RUQ2 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC9.3□□□□□ -0.92
Usf3B2RUQ2 Plxna4-201ENSMUST00000115096 12877 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 60.6 ms