Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
Thumpd1Q99J36 Phf8-211ENSMUST00000168501 6359 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
Thumpd1Q99J36 Gm28746-201ENSMUST00000187453 380 ntBASIC9.9□□□□□ -0.82
Thumpd1Q99J36 Gm2965-201ENSMUST00000198365 343 ntBASIC9.9□□□□□ -0.82
Thumpd1Q99J36 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Thumpd1Q99J36 Gm45575-201ENSMUST00000210283 548 ntBASIC9.9□□□□□ -0.82
Thumpd1Q99J36 AC151275.1-201ENSMUST00000224870 585 ntBASIC9.9□□□□□ -0.82
Thumpd1Q99J36 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Thumpd1Q99J36 D630029K05Rik-201ENSMUST00000033651 2133 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Thumpd1Q99J36 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC9.9□□□□□ -0.82
Thumpd1Q99J36 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
Thumpd1Q99J36 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Thumpd1Q99J36 Oxsm-201ENSMUST00000022311 3759 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Thumpd1Q99J36 Oprm1-212ENSMUST00000105603 2053 ntTSL 5 BASIC9.9□□□□□ -0.82
Thumpd1Q99J36 Rsph10b-203ENSMUST00000166847 2878 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
Thumpd1Q99J36 Tie1-203ENSMUST00000184261 4234 ntTSL 2 BASIC9.9□□□□□ -0.82
Thumpd1Q99J36 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Thumpd1Q99J36 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.83
Thumpd1Q99J36 Olfr1490-202ENSMUST00000213900 5165 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.83
Thumpd1Q99J36 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC9.9□□□□□ -0.83
Thumpd1Q99J36 Slc7a3-203ENSMUST00000113710 2750 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.83
Thumpd1Q99J36 Filip1l-202ENSMUST00000159414 3253 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
Thumpd1Q99J36 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.83
Thumpd1Q99J36 Olfr370-203ENSMUST00000214156 2475 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.83
Thumpd1Q99J36 Gm3765-201ENSMUST00000130985 1447 ntBASIC9.9□□□□□ -0.83
Thumpd1Q99J36 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
Thumpd1Q99J36 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Thumpd1Q99J36 Mkx-201ENSMUST00000079788 3202 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Thumpd1Q99J36 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
Thumpd1Q99J36 Cstf1-201ENSMUST00000116375 3451 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Thumpd1Q99J36 Fam184b-201ENSMUST00000016023 4236 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Thumpd1Q99J36 Rtn3-204ENSMUST00000088171 4973 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
Thumpd1Q99J36 Plekhg5-203ENSMUST00000105662 3933 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Thumpd1Q99J36 Akap12-202ENSMUST00000215696 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Thumpd1Q99J36 Sla2-202ENSMUST00000109561 2634 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Thumpd1Q99J36 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Thumpd1Q99J36 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC9.89□□□□□ -0.83
Thumpd1Q99J36 Polr3c-201ENSMUST00000029741 2390 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Thumpd1Q99J36 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Thumpd1Q99J36 Pear1-201ENSMUST00000029714 4260 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Thumpd1Q99J36 Catsper1-201ENSMUST00000043380 2061 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Thumpd1Q99J36 Plscr3-203ENSMUST00000108633 2785 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Thumpd1Q99J36 Nudt7-203ENSMUST00000109109 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Thumpd1Q99J36 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Thumpd1Q99J36 Rnf121-203ENSMUST00000106953 2545 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Thumpd1Q99J36 Clip1-203ENSMUST00000111561 5883 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Thumpd1Q99J36 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC9.89□□□□□ -0.83
Thumpd1Q99J36 C130060K24Rik-203ENSMUST00000170608 2953 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Thumpd1Q99J36 Rnf40-201ENSMUST00000033088 3906 ntTSL 5 BASIC9.89□□□□□ -0.83
Thumpd1Q99J36 Cln3-204ENSMUST00000116269 2487 ntAPPRIS P2 TSL 5 BASIC9.89□□□□□ -0.83
Thumpd1Q99J36 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Thumpd1Q99J36 Hsdl1-204ENSMUST00000212517 2215 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Thumpd1Q99J36 Ddr1-212ENSMUST00000166980 3627 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
Thumpd1Q99J36 Ap1b1-201ENSMUST00000009234 4085 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Thumpd1Q99J36 Mtmr7-205ENSMUST00000174205 2679 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Thumpd1Q99J36 Afap1-201ENSMUST00000064571 6618 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Thumpd1Q99J36 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Thumpd1Q99J36 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC9.89□□□□□ -0.83
Thumpd1Q99J36 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Thumpd1Q99J36 Gm25700-201ENSMUST00000177693 110 ntBASIC9.89□□□□□ -0.83
Thumpd1Q99J36 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC9.89□□□□□ -0.83
Thumpd1Q99J36 Gm28032-201ENSMUST00000184104 96 ntBASIC9.89□□□□□ -0.83
Thumpd1Q99J36 Gm29283-201ENSMUST00000187394 288 ntTSL 5 BASIC9.89□□□□□ -0.83
Thumpd1Q99J36 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
Thumpd1Q99J36 Gm38317-201ENSMUST00000195564 343 ntBASIC9.89□□□□□ -0.83
Thumpd1Q99J36 Gm45224-201ENSMUST00000208203 414 ntBASIC9.89□□□□□ -0.83
Thumpd1Q99J36 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC9.89□□□□□ -0.83
Thumpd1Q99J36 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC9.89□□□□□ -0.83
Thumpd1Q99J36 Gm40639-201ENSMUST00000214642 625 ntTSL 5 BASIC9.89□□□□□ -0.83
Thumpd1Q99J36 AC137950.2-201ENSMUST00000227127 1089 ntBASIC9.89□□□□□ -0.83
Thumpd1Q99J36 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC9.89□□□□□ -0.83
Thumpd1Q99J36 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Thumpd1Q99J36 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Thumpd1Q99J36 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Thumpd1Q99J36 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
Thumpd1Q99J36 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
Thumpd1Q99J36 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Thumpd1Q99J36 Oas1h-201ENSMUST00000072476 1703 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Thumpd1Q99J36 Rasgef1a-203ENSMUST00000203804 2183 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Thumpd1Q99J36 Armc8-202ENSMUST00000185524 2820 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Thumpd1Q99J36 Bace2-201ENSMUST00000047275 3736 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Thumpd1Q99J36 Camk2g-201ENSMUST00000071816 3703 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Thumpd1Q99J36 Slc25a12-206ENSMUST00000151937 6351 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Thumpd1Q99J36 Arhgap24-204ENSMUST00000112852 2783 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Thumpd1Q99J36 Scamp1-203ENSMUST00000152555 1877 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Thumpd1Q99J36 Kyat1-201ENSMUST00000044038 1876 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Thumpd1Q99J36 Dhx34-202ENSMUST00000118795 4076 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Thumpd1Q99J36 Abcf1-201ENSMUST00000043757 3161 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Thumpd1Q99J36 Syn2-203ENSMUST00000203450 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Thumpd1Q99J36 Cutal-203ENSMUST00000113068 2278 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Thumpd1Q99J36 Anks1b-233ENSMUST00000183156 4248 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Thumpd1Q99J36 Ttc23-201ENSMUST00000032774 2492 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
Thumpd1Q99J36 Apba2-201ENSMUST00000032732 3321 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Thumpd1Q99J36 Tardbp-210ENSMUST00000172073 6513 ntTSL 5 BASIC9.89□□□□□ -0.83
Thumpd1Q99J36 Csgalnact1-201ENSMUST00000078350 3943 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Thumpd1Q99J36 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Thumpd1Q99J36 Nampt-201ENSMUST00000020886 4527 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Thumpd1Q99J36 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Thumpd1Q99J36 Pgf-201ENSMUST00000004913 1582 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Thumpd1Q99J36 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms