Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Msh3-201ENSMUST00000022220 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Scaf4Q6PFF0 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Scaf4Q6PFF0 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Scaf4Q6PFF0 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Scaf4Q6PFF0 Gm14592-201ENSMUST00000117201 560 ntBASIC10.95□□□□□ -0.66
Scaf4Q6PFF0 Gm12012-201ENSMUST00000118857 1066 ntBASIC10.95□□□□□ -0.66
Scaf4Q6PFF0 Gm12196-201ENSMUST00000120954 262 ntBASIC10.95□□□□□ -0.66
Scaf4Q6PFF0 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Scaf4Q6PFF0 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC10.95□□□□□ -0.66
Scaf4Q6PFF0 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Scaf4Q6PFF0 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Scaf4Q6PFF0 Gm20482-202ENSMUST00000174729 825 ntBASIC10.95□□□□□ -0.66
Scaf4Q6PFF0 Mir7085-201ENSMUST00000184353 66 ntBASIC10.95□□□□□ -0.66
Scaf4Q6PFF0 Gm7003-201ENSMUST00000195089 312 ntBASIC10.95□□□□□ -0.66
Scaf4Q6PFF0 Gm43667-201ENSMUST00000198616 1095 ntBASIC10.95□□□□□ -0.66
Scaf4Q6PFF0 Ghrl-204ENSMUST00000203770 891 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Scaf4Q6PFF0 Gm17825-201ENSMUST00000206836 794 ntBASIC10.95□□□□□ -0.66
Scaf4Q6PFF0 Gm8342-201ENSMUST00000209839 757 ntBASIC10.95□□□□□ -0.66
Scaf4Q6PFF0 Gm19208-201ENSMUST00000213861 912 ntBASIC10.95□□□□□ -0.66
Scaf4Q6PFF0 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC10.95□□□□□ -0.66
Scaf4Q6PFF0 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Scaf4Q6PFF0 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Scaf4Q6PFF0 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Scaf4Q6PFF0 Gm9244-201ENSMUST00000056767 2129 ntBASIC10.95□□□□□ -0.66
Scaf4Q6PFF0 Armcx2-202ENSMUST00000113193 3666 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Scaf4Q6PFF0 Gm30228-201ENSMUST00000218501 1949 ntTSL 3 BASIC10.95□□□□□ -0.66
Scaf4Q6PFF0 Pigo-202ENSMUST00000098109 4239 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Scaf4Q6PFF0 Exosc10-202ENSMUST00000076022 2682 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Scaf4Q6PFF0 Optc-201ENSMUST00000124051 1885 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Scaf4Q6PFF0 Arhgap33os-201ENSMUST00000124276 2648 ntTSL 2 BASIC10.95□□□□□ -0.66
Scaf4Q6PFF0 Zer1-201ENSMUST00000044751 4100 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Scaf4Q6PFF0 Dhx34-202ENSMUST00000118795 4076 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Scaf4Q6PFF0 Ttc7b-206ENSMUST00000223020 3307 ntTSL 5 BASIC10.95□□□□□ -0.66
Scaf4Q6PFF0 Clp1-203ENSMUST00000165219 2564 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Scaf4Q6PFF0 Gm10827-201ENSMUST00000181897 2586 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Scaf4Q6PFF0 Serac1-202ENSMUST00000097432 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Scaf4Q6PFF0 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Scaf4Q6PFF0 Filip1l-202ENSMUST00000159414 3253 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Scaf4Q6PFF0 Gm28268-201ENSMUST00000188966 2528 ntTSL 5 BASIC10.95□□□□□ -0.66
Scaf4Q6PFF0 Hectd4-201ENSMUST00000042614 15482 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Scaf4Q6PFF0 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC10.95□□□□□ -0.66
Scaf4Q6PFF0 Acsm5-205ENSMUST00000207440 2494 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Scaf4Q6PFF0 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Scaf4Q6PFF0 AC122367.1-201ENSMUST00000221978 1709 ntBASIC10.95□□□□□ -0.66
Scaf4Q6PFF0 Tcf4-203ENSMUST00000114977 3070 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Scaf4Q6PFF0 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Scaf4Q6PFF0 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Scaf4Q6PFF0 Papln-201ENSMUST00000021646 4260 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Scaf4Q6PFF0 Ern2-201ENSMUST00000033153 2914 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Scaf4Q6PFF0 Dcun1d2-204ENSMUST00000110840 2853 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Scaf4Q6PFF0 Tacc2-205ENSMUST00000207282 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Scaf4Q6PFF0 Specc1l-204ENSMUST00000218766 4725 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Scaf4Q6PFF0 Imp4-201ENSMUST00000027303 5836 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Scaf4Q6PFF0 Trp53inp2-201ENSMUST00000043237 3979 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Scaf4Q6PFF0 Lig3-210ENSMUST00000173347 3631 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Scaf4Q6PFF0 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Scaf4Q6PFF0 Prpf6-203ENSMUST00000136481 3048 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Scaf4Q6PFF0 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Scaf4Q6PFF0 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Scaf4Q6PFF0 Klhl7-201ENSMUST00000030841 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Scaf4Q6PFF0 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Scaf4Q6PFF0 Golm1-201ENSMUST00000022039 3954 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Scaf4Q6PFF0 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Scaf4Q6PFF0 Rab3gap2-201ENSMUST00000069652 7052 ntAPPRIS P2 TSL 5 BASIC10.94□□□□□ -0.66
Scaf4Q6PFF0 Katnal2-208ENSMUST00000137498 1824 ntTSL 5 BASIC10.94□□□□□ -0.66
Scaf4Q6PFF0 Nell2-202ENSMUST00000166170 3366 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Scaf4Q6PFF0 Gm14381-201ENSMUST00000122105 414 ntBASIC10.94□□□□□ -0.66
Scaf4Q6PFF0 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC10.94□□□□□ -0.66
Scaf4Q6PFF0 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Scaf4Q6PFF0 Gm3150-201ENSMUST00000166418 204 ntBASIC10.94□□□□□ -0.66
Scaf4Q6PFF0 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC10.94□□□□□ -0.66
Scaf4Q6PFF0 Gm8100-201ENSMUST00000182906 988 ntBASIC10.94□□□□□ -0.66
Scaf4Q6PFF0 Gm38266-201ENSMUST00000194931 421 ntBASIC10.94□□□□□ -0.66
Scaf4Q6PFF0 Gm44262-201ENSMUST00000204969 372 ntBASIC10.94□□□□□ -0.66
Scaf4Q6PFF0 Gm34868-201ENSMUST00000218341 530 ntTSL 3 BASIC10.94□□□□□ -0.66
Scaf4Q6PFF0 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC10.94□□□□□ -0.66
Scaf4Q6PFF0 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC10.94□□□□□ -0.66
Scaf4Q6PFF0 AC133602.1-201ENSMUST00000227510 509 ntBASIC10.94□□□□□ -0.66
Scaf4Q6PFF0 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Scaf4Q6PFF0 Klk1b7-ps-201ENSMUST00000078897 448 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Scaf4Q6PFF0 Gm25125-201ENSMUST00000083340 136 ntBASIC10.94□□□□□ -0.66
Scaf4Q6PFF0 Ttll9-201ENSMUST00000099197 1797 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Scaf4Q6PFF0 Srpx2-201ENSMUST00000033606 2290 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Scaf4Q6PFF0 Fam13c-201ENSMUST00000062883 3262 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Scaf4Q6PFF0 Nanog-201ENSMUST00000012540 2211 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Scaf4Q6PFF0 Ptpre-205ENSMUST00000210833 2209 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Scaf4Q6PFF0 AC113282.1-201ENSMUST00000225278 1707 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Scaf4Q6PFF0 Prph2-201ENSMUST00000024773 2665 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Scaf4Q6PFF0 Gtf2i-219ENSMUST00000174155 4141 ntAPPRIS P4 TSL 2 BASIC10.94□□□□□ -0.66
Scaf4Q6PFF0 Slc25a17-201ENSMUST00000023040 1667 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Scaf4Q6PFF0 Myo15-203ENSMUST00000094135 11715 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Scaf4Q6PFF0 Gm43372-201ENSMUST00000202662 3016 ntBASIC10.94□□□□□ -0.66
Scaf4Q6PFF0 Golga2-203ENSMUST00000113377 4361 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Scaf4Q6PFF0 Gm45089-201ENSMUST00000208082 2040 ntBASIC10.94□□□□□ -0.66
Scaf4Q6PFF0 Dffa-201ENSMUST00000030816 2457 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Scaf4Q6PFF0 AC122382.1-201ENSMUST00000225869 2371 ntBASIC10.94□□□□□ -0.66
Scaf4Q6PFF0 Tyro3-202ENSMUST00000110783 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Scaf4Q6PFF0 Gm37651-201ENSMUST00000194679 1494 ntBASIC10.93□□□□□ -0.66
Scaf4Q6PFF0 Ippk-202ENSMUST00000220447 4421 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Scaf4Q6PFF0 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms