Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Oprm1-204ENSMUST00000063036 1427 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trim43aQ3TL54 Grem1-201ENSMUST00000099575 4148 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim43aQ3TL54 Gm23596-201ENSMUST00000104304 132 ntBASIC11.81□□□□□ -0.52
Trim43aQ3TL54 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim43aQ3TL54 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim43aQ3TL54 Gm16481-201ENSMUST00000119074 1227 ntBASIC11.81□□□□□ -0.52
Trim43aQ3TL54 Gm8566-201ENSMUST00000120174 465 ntBASIC11.81□□□□□ -0.52
Trim43aQ3TL54 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trim43aQ3TL54 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC11.81□□□□□ -0.52
Trim43aQ3TL54 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trim43aQ3TL54 Mir5120-201ENSMUST00000175020 78 ntBASIC11.81□□□□□ -0.52
Trim43aQ3TL54 Gm27530-201ENSMUST00000184096 98 ntBASIC11.81□□□□□ -0.52
Trim43aQ3TL54 Gm28450-201ENSMUST00000187349 638 ntBASIC11.81□□□□□ -0.52
Trim43aQ3TL54 Gm43378-201ENSMUST00000199336 582 ntBASIC11.81□□□□□ -0.52
Trim43aQ3TL54 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trim43aQ3TL54 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim43aQ3TL54 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Trim43aQ3TL54 Tcn2-206ENSMUST00000109992 1945 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Trim43aQ3TL54 Psd-202ENSMUST00000096029 3903 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Trim43aQ3TL54 Gm30648-202ENSMUST00000200648 1957 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trim43aQ3TL54 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Trim43aQ3TL54 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim43aQ3TL54 Sgsm1-202ENSMUST00000057209 4339 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trim43aQ3TL54 Steap3-203ENSMUST00000112641 5158 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim43aQ3TL54 Acsbg1-201ENSMUST00000034822 2880 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim43aQ3TL54 Nos1ap-203ENSMUST00000160466 1533 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trim43aQ3TL54 Gm37368-201ENSMUST00000193173 3212 ntBASIC11.81□□□□□ -0.52
Trim43aQ3TL54 Hmg20a-205ENSMUST00000215269 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim43aQ3TL54 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Trim43aQ3TL54 Gtf2ird1-204ENSMUST00000100652 3693 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim43aQ3TL54 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trim43aQ3TL54 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC11.8□□□□□ -0.52
Trim43aQ3TL54 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trim43aQ3TL54 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim43aQ3TL54 Rasgrp4-213ENSMUST00000204845 3182 ntTSL 5 BASIC11.8□□□□□ -0.52
Trim43aQ3TL54 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Trim43aQ3TL54 Ttc23-201ENSMUST00000032774 2492 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim43aQ3TL54 Hk3-201ENSMUST00000052949 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim43aQ3TL54 L3mbtl1-201ENSMUST00000035751 2724 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Trim43aQ3TL54 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC11.8□□□□□ -0.52
Trim43aQ3TL54 Gm23949-201ENSMUST00000104027 127 ntBASIC11.8□□□□□ -0.52
Trim43aQ3TL54 Gm25148-201ENSMUST00000104611 123 ntBASIC11.8□□□□□ -0.52
Trim43aQ3TL54 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Trim43aQ3TL54 Gm14208-201ENSMUST00000119645 678 ntBASIC11.8□□□□□ -0.52
Trim43aQ3TL54 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trim43aQ3TL54 Gm27441-201ENSMUST00000185000 105 ntBASIC11.8□□□□□ -0.52
Trim43aQ3TL54 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trim43aQ3TL54 Gm37666-201ENSMUST00000194110 866 ntBASIC11.8□□□□□ -0.52
Trim43aQ3TL54 Gm43692-201ENSMUST00000198236 1062 ntBASIC11.8□□□□□ -0.52
Trim43aQ3TL54 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC11.8□□□□□ -0.52
Trim43aQ3TL54 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC11.8□□□□□ -0.52
Trim43aQ3TL54 Gm45575-201ENSMUST00000210283 548 ntBASIC11.8□□□□□ -0.52
Trim43aQ3TL54 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC11.8□□□□□ -0.52
Trim43aQ3TL54 AC151275.1-201ENSMUST00000224870 585 ntBASIC11.8□□□□□ -0.52
Trim43aQ3TL54 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim43aQ3TL54 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim43aQ3TL54 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim43aQ3TL54 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim43aQ3TL54 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim43aQ3TL54 Prpf40b-202ENSMUST00000118287 3129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim43aQ3TL54 Gm43289-201ENSMUST00000200537 1475 ntBASIC11.8□□□□□ -0.52
Trim43aQ3TL54 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC11.8□□□□□ -0.52
Trim43aQ3TL54 Zfp872-202ENSMUST00000178901 2958 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim43aQ3TL54 B630019A10Rik-201ENSMUST00000149488 2407 ntTSL 2 BASIC11.8□□□□□ -0.52
Trim43aQ3TL54 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim43aQ3TL54 Kyat1-201ENSMUST00000044038 1876 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim43aQ3TL54 Pygl-201ENSMUST00000071250 2825 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim43aQ3TL54 Pcdhga10-201ENSMUST00000193404 4732 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim43aQ3TL54 Synpo2l-201ENSMUST00000057090 4394 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trim43aQ3TL54 Slc29a3-201ENSMUST00000117513 5240 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim43aQ3TL54 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim43aQ3TL54 AC108416.1-201ENSMUST00000228755 1558 ntBASIC11.79□□□□□ -0.52
Trim43aQ3TL54 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim43aQ3TL54 Slc25a44-203ENSMUST00000193433 3429 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim43aQ3TL54 Cyp2j13-202ENSMUST00000097973 1648 ntTSL 5 BASIC11.79□□□□□ -0.52
Trim43aQ3TL54 Vmn1r16-203ENSMUST00000228356 3492 ntAPPRIS ALT2 BASIC11.79□□□□□ -0.52
Trim43aQ3TL54 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim43aQ3TL54 Hif1an-201ENSMUST00000040455 6194 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim43aQ3TL54 Pde1c-201ENSMUST00000044505 3907 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim43aQ3TL54 Psat1-205ENSMUST00000162053 2291 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trim43aQ3TL54 Angptl2-201ENSMUST00000004208 3339 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim43aQ3TL54 Fcamr-202ENSMUST00000112477 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim43aQ3TL54 Scamp1-203ENSMUST00000152555 1877 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trim43aQ3TL54 Tsc22d4-202ENSMUST00000100539 3983 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim43aQ3TL54 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim43aQ3TL54 Gm23061-201ENSMUST00000102348 116 ntBASIC11.79□□□□□ -0.52
Trim43aQ3TL54 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC11.79□□□□□ -0.52
Trim43aQ3TL54 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC11.79□□□□□ -0.52
Trim43aQ3TL54 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC11.79□□□□□ -0.52
Trim43aQ3TL54 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC11.79□□□□□ -0.52
Trim43aQ3TL54 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trim43aQ3TL54 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim43aQ3TL54 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Trim43aQ3TL54 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC11.79□□□□□ -0.52
Trim43aQ3TL54 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim43aQ3TL54 Gm6108-201ENSMUST00000208365 367 ntBASIC11.79□□□□□ -0.52
Trim43aQ3TL54 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC11.79□□□□□ -0.52
Trim43aQ3TL54 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC11.79□□□□□ -0.52
Trim43aQ3TL54 Col9a1-201ENSMUST00000054588 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim43aQ3TL54 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 229.1 ms