Protein–RNA interactions for Protein: P50446

Krt6a, Keratin, type II cytoskeletal 6A, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt6aP50446 Lamb1-201ENSMUST00000002979 5784 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Krt6aP50446 Gm15566-201ENSMUST00000121130 590 ntBASIC11.03□□□□□ -0.64
Krt6aP50446 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC11.03□□□□□ -0.64
Krt6aP50446 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Krt6aP50446 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Krt6aP50446 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Krt6aP50446 Gm5733-201ENSMUST00000190232 939 ntBASIC11.03□□□□□ -0.64
Krt6aP50446 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC11.03□□□□□ -0.64
Krt6aP50446 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Krt6aP50446 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC11.03□□□□□ -0.64
Krt6aP50446 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Krt6aP50446 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Krt6aP50446 Invs-201ENSMUST00000030029 5633 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Krt6aP50446 Pa2g4-202ENSMUST00000131728 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Krt6aP50446 Mindy4-201ENSMUST00000053094 4270 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Krt6aP50446 Col6a3-201ENSMUST00000056925 10106 ntTSL 5 BASIC11.03□□□□□ -0.64
Krt6aP50446 Scn5a-203ENSMUST00000120420 7536 ntAPPRIS ALT1 TSL 5 BASIC11.03□□□□□ -0.64
Krt6aP50446 Amotl1-201ENSMUST00000013220 8957 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Krt6aP50446 Col6a4-201ENSMUST00000121963 7371 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Krt6aP50446 Gm4846-201ENSMUST00000143922 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Krt6aP50446 Mkl1-204ENSMUST00000134469 4392 ntTSL 5 BASIC11.03□□□□□ -0.64
Krt6aP50446 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Krt6aP50446 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Krt6aP50446 Gdf2-201ENSMUST00000100720 2988 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Krt6aP50446 Zfp872-202ENSMUST00000178901 2958 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Krt6aP50446 AC131586.1-201ENSMUST00000228844 2964 ntBASIC11.03□□□□□ -0.64
Krt6aP50446 Rps6ka6-204ENSMUST00000113428 4135 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Krt6aP50446 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Krt6aP50446 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Krt6aP50446 Pik3cb-201ENSMUST00000035037 6478 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Krt6aP50446 Ift88os-201ENSMUST00000149702 2016 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Krt6aP50446 Cmya5-201ENSMUST00000062122 11850 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Krt6aP50446 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Krt6aP50446 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC11.02□□□□□ -0.64
Krt6aP50446 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC11.02□□□□□ -0.64
Krt6aP50446 Ybey-201ENSMUST00000049185 4522 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Krt6aP50446 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.64
Krt6aP50446 Gm15883-201ENSMUST00000153562 1690 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Krt6aP50446 Dkk2-201ENSMUST00000029665 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Krt6aP50446 Pdcd10-205ENSMUST00000161137 1927 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Krt6aP50446 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC11.02□□□□□ -0.65
Krt6aP50446 Ccdc85a-206ENSMUST00000146385 3798 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Krt6aP50446 Tmem184b-202ENSMUST00000178522 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Krt6aP50446 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Krt6aP50446 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
Krt6aP50446 Gm4294-201ENSMUST00000105169 614 ntBASIC11.02□□□□□ -0.65
Krt6aP50446 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Krt6aP50446 Gm8111-201ENSMUST00000117659 987 ntBASIC11.02□□□□□ -0.65
Krt6aP50446 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC11.02□□□□□ -0.65
Krt6aP50446 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC11.02□□□□□ -0.65
Krt6aP50446 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC11.02□□□□□ -0.65
Krt6aP50446 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Krt6aP50446 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC11.02□□□□□ -0.65
Krt6aP50446 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Krt6aP50446 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC11.02□□□□□ -0.65
Krt6aP50446 Gm9540-201ENSMUST00000188230 478 ntBASIC11.02□□□□□ -0.65
Krt6aP50446 Gm37301-201ENSMUST00000195412 568 ntBASIC11.02□□□□□ -0.65
Krt6aP50446 Gm42682-201ENSMUST00000198349 1265 ntBASIC11.02□□□□□ -0.65
Krt6aP50446 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Krt6aP50446 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC11.02□□□□□ -0.65
Krt6aP50446 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
Krt6aP50446 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Krt6aP50446 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Krt6aP50446 Txlng-201ENSMUST00000041370 3862 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Krt6aP50446 D930048N14Rik-202ENSMUST00000117859 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Krt6aP50446 C130021I20Rik-201ENSMUST00000147294 3693 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Krt6aP50446 C030037D09Rik-203ENSMUST00000138007 3220 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Krt6aP50446 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Krt6aP50446 Nup210-202ENSMUST00000113509 6893 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Krt6aP50446 Cln8-201ENSMUST00000027554 6857 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Krt6aP50446 Tnk2-204ENSMUST00000115123 4225 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Krt6aP50446 Gpm6b-209ENSMUST00000112235 4480 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Krt6aP50446 Mypn-201ENSMUST00000095580 5246 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Krt6aP50446 Zmat1-201ENSMUST00000064659 3501 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Krt6aP50446 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC11.02□□□□□ -0.65
Krt6aP50446 Samd4-206ENSMUST00000137543 6874 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Krt6aP50446 Col20a1-202ENSMUST00000149179 3867 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Krt6aP50446 Optc-205ENSMUST00000153617 1615 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Krt6aP50446 Uaca-202ENSMUST00000214354 4417 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Krt6aP50446 Arap1-201ENSMUST00000084895 4404 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Krt6aP50446 Psd-202ENSMUST00000096029 3903 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Krt6aP50446 Scn10a-204ENSMUST00000214408 5877 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Krt6aP50446 Ap1b1-201ENSMUST00000009234 4085 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Krt6aP50446 Ttll5-205ENSMUST00000110224 4647 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Krt6aP50446 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Krt6aP50446 Myh13-203ENSMUST00000180845 5991 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Krt6aP50446 Gm37651-201ENSMUST00000194679 1494 ntBASIC11.01□□□□□ -0.65
Krt6aP50446 Sirpa-201ENSMUST00000049262 3644 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Krt6aP50446 Car12-202ENSMUST00000085420 3639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Krt6aP50446 Pnma2-201ENSMUST00000089236 5518 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Krt6aP50446 Tcp10a-203ENSMUST00000129709 1778 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Krt6aP50446 Nrg1-212ENSMUST00000208598 1778 ntTSL 5 BASIC11.01□□□□□ -0.65
Krt6aP50446 Gm17244-201ENSMUST00000192482 3416 ntBASIC11.01□□□□□ -0.65
Krt6aP50446 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Krt6aP50446 Snapc1-201ENSMUST00000021532 6275 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Krt6aP50446 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Krt6aP50446 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Krt6aP50446 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Krt6aP50446 Gm15515-201ENSMUST00000117827 822 ntBASIC11.01□□□□□ -0.65
Krt6aP50446 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC11.01□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 67 ms