Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Col8a2P25318 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Col8a2P25318 Taar8a-201ENSMUST00000051133 1035 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
Col8a2P25318 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
Col8a2P25318 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Col8a2P25318 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC9.28□□□□□ -0.92
Col8a2P25318 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
Col8a2P25318 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Col8a2P25318 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC9.28□□□□□ -0.92
Col8a2P25318 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Col8a2P25318 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
Col8a2P25318 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Col8a2P25318 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Col8a2P25318 Gm5739-201ENSMUST00000208601 1703 ntBASIC9.28□□□□□ -0.92
Col8a2P25318 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Col8a2P25318 Atp6v0a4-202ENSMUST00000114908 3307 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Col8a2P25318 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Col8a2P25318 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
Col8a2P25318 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Col8a2P25318 Rbbp5-201ENSMUST00000027700 3385 ntTSL 1 (best) BASIC9.27□□□□□ -0.92
Col8a2P25318 Trmt12-201ENSMUST00000036937 4454 ntAPPRIS P1 BASIC9.27□□□□□ -0.92
Col8a2P25318 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.92
Col8a2P25318 Gm20758-201ENSMUST00000220339 2171 ntTSL 1 (best) BASIC9.27□□□□□ -0.92
Col8a2P25318 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC9.27□□□□□ -0.92
Col8a2P25318 Prkd2-202ENSMUST00000168093 3251 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
Col8a2P25318 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC9.27□□□□□ -0.92
Col8a2P25318 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Col8a2P25318 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Col8a2P25318 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
Col8a2P25318 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Col8a2P25318 Cwc25-202ENSMUST00000107579 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Col8a2P25318 Fam222b-203ENSMUST00000155571 3358 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Col8a2P25318 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Col8a2P25318 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.93
Col8a2P25318 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC9.27□□□□□ -0.93
Col8a2P25318 Gm6322-201ENSMUST00000118789 1004 ntBASIC9.27□□□□□ -0.93
Col8a2P25318 Gm12986-201ENSMUST00000119037 967 ntBASIC9.27□□□□□ -0.93
Col8a2P25318 Gm8302-201ENSMUST00000119217 852 ntBASIC9.27□□□□□ -0.93
Col8a2P25318 Rbmx2-ps-201ENSMUST00000119377 930 ntBASIC9.27□□□□□ -0.93
Col8a2P25318 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC9.27□□□□□ -0.93
Col8a2P25318 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC9.27□□□□□ -0.93
Col8a2P25318 Gm11417-201ENSMUST00000150536 920 ntTSL 2 BASIC9.27□□□□□ -0.93
Col8a2P25318 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Col8a2P25318 Gm20471-201ENSMUST00000172793 626 ntTSL 3 BASIC9.27□□□□□ -0.93
Col8a2P25318 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Col8a2P25318 Gm9116-201ENSMUST00000192400 1018 ntBASIC9.27□□□□□ -0.93
Col8a2P25318 Hyal2-206ENSMUST00000195681 2968 ntBASIC9.27□□□□□ -0.93
Col8a2P25318 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
Col8a2P25318 Tex29-205ENSMUST00000209692 884 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.93
Col8a2P25318 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC9.27□□□□□ -0.93
Col8a2P25318 Gm35657-201ENSMUST00000215869 989 ntTSL 5 BASIC9.27□□□□□ -0.93
Col8a2P25318 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Col8a2P25318 Gm5805-201ENSMUST00000072779 456 ntBASIC9.27□□□□□ -0.93
Col8a2P25318 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
Col8a2P25318 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Col8a2P25318 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Col8a2P25318 Gm21136-201ENSMUST00000186812 2575 ntBASIC9.27□□□□□ -0.93
Col8a2P25318 Gm6605-201ENSMUST00000031488 2574 ntBASIC9.27□□□□□ -0.93
Col8a2P25318 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Col8a2P25318 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Col8a2P25318 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Col8a2P25318 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Col8a2P25318 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Col8a2P25318 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC9.27□□□□□ -0.93
Col8a2P25318 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Col8a2P25318 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Col8a2P25318 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Col8a2P25318 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC9.27□□□□□ -0.93
Col8a2P25318 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.93
Col8a2P25318 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Col8a2P25318 Anxa11-202ENSMUST00000112364 1625 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Col8a2P25318 Cpeb1-209ENSMUST00000178892 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Col8a2P25318 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Col8a2P25318 Gm38055-201ENSMUST00000195353 2217 ntBASIC9.27□□□□□ -0.93
Col8a2P25318 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC9.27□□□□□ -0.93
Col8a2P25318 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Col8a2P25318 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Col8a2P25318 Tmem154-201ENSMUST00000107682 3342 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Col8a2P25318 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Col8a2P25318 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Col8a2P25318 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Col8a2P25318 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Col8a2P25318 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Col8a2P25318 Dnajc14-202ENSMUST00000217745 4133 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Col8a2P25318 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Col8a2P25318 Ift88-201ENSMUST00000122063 3088 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Col8a2P25318 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Col8a2P25318 Tab1-201ENSMUST00000023050 2931 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Col8a2P25318 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Col8a2P25318 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Col8a2P25318 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Col8a2P25318 Cfap54-201ENSMUST00000020200 2473 ntAPPRIS ALT2 TSL 5 BASIC9.26□□□□□ -0.93
Col8a2P25318 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Col8a2P25318 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Col8a2P25318 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Col8a2P25318 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC9.26□□□□□ -0.93
Col8a2P25318 Smco1-201ENSMUST00000093183 1408 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
Col8a2P25318 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC9.26□□□□□ -0.93
Col8a2P25318 Oprl1-204ENSMUST00000108767 1248 ntAPPRIS P3 TSL 1 (best) BASIC9.26□□□□□ -0.93
Col8a2P25318 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms