Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 C130060K24Rik-203ENSMUST00000170608 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Pcdh1F7BJK1 Unkl-202ENSMUST00000039734 4779 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Pcdh1F7BJK1 Armcx2-202ENSMUST00000113193 3666 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Pcdh1F7BJK1 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Pcdh1F7BJK1 Parvg-207ENSMUST00000163667 2700 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Pcdh1F7BJK1 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Pcdh1F7BJK1 Kalrn-205ENSMUST00000114953 4722 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Pcdh1F7BJK1 Rasgrp4-213ENSMUST00000204845 3182 ntTSL 5 BASIC10.04□□□□□ -0.8
Pcdh1F7BJK1 Cln3-204ENSMUST00000116269 2487 ntAPPRIS P2 TSL 5 BASIC10.04□□□□□ -0.8
Pcdh1F7BJK1 Olfr370-203ENSMUST00000214156 2475 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Pcdh1F7BJK1 Ttc23-201ENSMUST00000032774 2492 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Pcdh1F7BJK1 Fibcd1-201ENSMUST00000028188 4751 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Pcdh1F7BJK1 Olfr1113-202ENSMUST00000215611 1949 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Pcdh1F7BJK1 Rin1-208ENSMUST00000225427 4503 ntAPPRIS P2 BASIC10.03□□□□□ -0.8
Pcdh1F7BJK1 Col9a1-201ENSMUST00000054588 3834 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Pcdh1F7BJK1 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Pcdh1F7BJK1 Cacna1c-219ENSMUST00000189389 6603 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Pcdh1F7BJK1 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Pcdh1F7BJK1 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC10.03□□□□□ -0.8
Pcdh1F7BJK1 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Pcdh1F7BJK1 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC10.03□□□□□ -0.8
Pcdh1F7BJK1 Cfb-207ENSMUST00000176203 2733 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Pcdh1F7BJK1 Rsph10b-203ENSMUST00000166847 2878 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Pcdh1F7BJK1 Anxa7-201ENSMUST00000065504 2851 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Pcdh1F7BJK1 Fam228a-201ENSMUST00000111154 3004 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Pcdh1F7BJK1 Chic1-201ENSMUST00000116547 7375 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Pcdh1F7BJK1 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Pcdh1F7BJK1 Gm12380-201ENSMUST00000119012 544 ntBASIC10.03□□□□□ -0.8
Pcdh1F7BJK1 Vmn1r207-ps-201ENSMUST00000119931 1073 ntBASIC10.03□□□□□ -0.8
Pcdh1F7BJK1 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC10.03□□□□□ -0.8
Pcdh1F7BJK1 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Pcdh1F7BJK1 Scamp1-203ENSMUST00000152555 1877 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Pcdh1F7BJK1 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Pcdh1F7BJK1 Gm20618-202ENSMUST00000177482 1227 ntTSL 3 BASIC10.03□□□□□ -0.8
Pcdh1F7BJK1 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Pcdh1F7BJK1 Gm27441-201ENSMUST00000185000 105 ntBASIC10.03□□□□□ -0.8
Pcdh1F7BJK1 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Pcdh1F7BJK1 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Pcdh1F7BJK1 Gm45433-201ENSMUST00000209386 247 ntBASIC10.03□□□□□ -0.8
Pcdh1F7BJK1 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC10.03□□□□□ -0.8
Pcdh1F7BJK1 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Pcdh1F7BJK1 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Pcdh1F7BJK1 Kyat1-201ENSMUST00000044038 1876 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Pcdh1F7BJK1 Pbp2-201ENSMUST00000050471 1279 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Pcdh1F7BJK1 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Pcdh1F7BJK1 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Pcdh1F7BJK1 Stk4-201ENSMUST00000018353 5232 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Pcdh1F7BJK1 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Pcdh1F7BJK1 Gdf2-201ENSMUST00000100720 2988 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Pcdh1F7BJK1 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC10.03□□□□□ -0.8
Pcdh1F7BJK1 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Pcdh1F7BJK1 Psd-202ENSMUST00000096029 3903 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Pcdh1F7BJK1 Sept2-201ENSMUST00000027495 3779 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Pcdh1F7BJK1 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Pcdh1F7BJK1 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Pcdh1F7BJK1 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Pcdh1F7BJK1 Tnfsf13b-203ENSMUST00000207792 4771 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Pcdh1F7BJK1 Psat1-205ENSMUST00000162053 2291 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Pcdh1F7BJK1 Gm42602-201ENSMUST00000200288 3224 ntBASIC10.03□□□□□ -0.8
Pcdh1F7BJK1 Apobec3-205ENSMUST00000175752 1977 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Pcdh1F7BJK1 Myh13-203ENSMUST00000180845 5991 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Pcdh1F7BJK1 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC10.02□□□□□ -0.8
Pcdh1F7BJK1 Pnpla6-201ENSMUST00000004681 4438 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Pcdh1F7BJK1 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Pcdh1F7BJK1 Asb8-204ENSMUST00000143400 2226 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Pcdh1F7BJK1 Ank2-214ENSMUST00000182547 2428 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Pcdh1F7BJK1 Prr5l-210ENSMUST00000171088 4296 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
Pcdh1F7BJK1 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Pcdh1F7BJK1 Gm23061-201ENSMUST00000102348 116 ntBASIC10.02□□□□□ -0.81
Pcdh1F7BJK1 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
Pcdh1F7BJK1 Gm15711-201ENSMUST00000118889 535 ntBASIC10.02□□□□□ -0.81
Pcdh1F7BJK1 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC10.02□□□□□ -0.81
Pcdh1F7BJK1 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC10.02□□□□□ -0.81
Pcdh1F7BJK1 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC10.02□□□□□ -0.81
Pcdh1F7BJK1 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Pcdh1F7BJK1 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC10.02□□□□□ -0.81
Pcdh1F7BJK1 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC10.02□□□□□ -0.81
Pcdh1F7BJK1 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Pcdh1F7BJK1 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Pcdh1F7BJK1 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Pcdh1F7BJK1 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
Pcdh1F7BJK1 Arhgap24-203ENSMUST00000094559 3346 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Pcdh1F7BJK1 Mgll-204ENSMUST00000113585 3676 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Pcdh1F7BJK1 Pcsk9-201ENSMUST00000049507 3521 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Pcdh1F7BJK1 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Pcdh1F7BJK1 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Pcdh1F7BJK1 Tulp2-210ENSMUST00000210868 1664 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Pcdh1F7BJK1 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Pcdh1F7BJK1 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Pcdh1F7BJK1 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC10.02□□□□□ -0.81
Pcdh1F7BJK1 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC10.02□□□□□ -0.81
Pcdh1F7BJK1 Clec12b-201ENSMUST00000032261 1521 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Pcdh1F7BJK1 Ccdc63-201ENSMUST00000058960 2299 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Pcdh1F7BJK1 Kcnab2-207ENSMUST00000160884 3922 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
Pcdh1F7BJK1 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
Pcdh1F7BJK1 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC10.01□□□□□ -0.81
Pcdh1F7BJK1 Sgsm1-202ENSMUST00000057209 4339 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Pcdh1F7BJK1 Gm37368-201ENSMUST00000193173 3212 ntBASIC10.01□□□□□ -0.81
Pcdh1F7BJK1 AC108416.1-201ENSMUST00000228755 1558 ntBASIC10.01□□□□□ -0.81
Pcdh1F7BJK1 H2-M10.3-201ENSMUST00000073546 1593 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms