Protein–RNA interactions for Protein: Q0GGX2

Znf541, Zinc finger protein 541, mousemouse

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Znf541Q0GGX2 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Znf541Q0GGX2 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Znf541Q0GGX2 Lpin3-204ENSMUST00000109457 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Znf541Q0GGX2 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC14.02□□□□□ -0.17
Znf541Q0GGX2 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Znf541Q0GGX2 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Znf541Q0GGX2 Gm37160-201ENSMUST00000193081 1689 ntBASIC14.02□□□□□ -0.17
Znf541Q0GGX2 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Znf541Q0GGX2 Hddc3-201ENSMUST00000032747 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Znf541Q0GGX2 Gm42858-201ENSMUST00000202512 1704 ntBASIC14.02□□□□□ -0.17
Znf541Q0GGX2 Sez6l-206ENSMUST00000212758 2664 ntTSL 5 BASIC14.01□□□□□ -0.17
Znf541Q0GGX2 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Znf541Q0GGX2 Lig3-212ENSMUST00000173727 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Znf541Q0GGX2 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
Znf541Q0GGX2 Ly6e-202ENSMUST00000169343 2154 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Znf541Q0GGX2 Ttc1-201ENSMUST00000048578 1438 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Znf541Q0GGX2 Gm1661-201ENSMUST00000077500 1422 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Znf541Q0GGX2 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Znf541Q0GGX2 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Znf541Q0GGX2 Mylk3-202ENSMUST00000121972 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Znf541Q0GGX2 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Znf541Q0GGX2 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Znf541Q0GGX2 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Znf541Q0GGX2 Dmrtc1b-201ENSMUST00000101324 1200 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Znf541Q0GGX2 Opn1mw-202ENSMUST00000101457 1233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Znf541Q0GGX2 Gm22937-201ENSMUST00000103954 131 ntBASIC14.01□□□□□ -0.17
Znf541Q0GGX2 Styxl1-203ENSMUST00000111162 726 ntTSL 5 BASIC14.01□□□□□ -0.17
Znf541Q0GGX2 Dmrtc1b-202ENSMUST00000113609 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Znf541Q0GGX2 Fmr1nb-203ENSMUST00000114647 679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Znf541Q0GGX2 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC14.01□□□□□ -0.17
Znf541Q0GGX2 Gm12950-201ENSMUST00000121683 417 ntBASIC14.01□□□□□ -0.17
Znf541Q0GGX2 Gm12628-201ENSMUST00000122193 382 ntBASIC14.01□□□□□ -0.17
Znf541Q0GGX2 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC14.01□□□□□ -0.17
Znf541Q0GGX2 Gm13802-201ENSMUST00000150159 663 ntTSL 3 BASIC14.01□□□□□ -0.17
Znf541Q0GGX2 Gm11915-201ENSMUST00000153669 358 ntTSL 5 BASIC14.01□□□□□ -0.17
Znf541Q0GGX2 Gm13272-201ENSMUST00000179425 811 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Znf541Q0GGX2 Anapc16-203ENSMUST00000182152 847 ntTSL 2 BASIC14.01□□□□□ -0.17
Znf541Q0GGX2 Mrgpra4-201ENSMUST00000087092 1259 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Znf541Q0GGX2 n-R5s71-201ENSMUST00000093668 119 ntBASIC14.01□□□□□ -0.17
Znf541Q0GGX2 Gm11470-201ENSMUST00000118868 1475 ntBASIC14.01□□□□□ -0.17
Znf541Q0GGX2 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Znf541Q0GGX2 Ube2q2-203ENSMUST00000122441 2081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Znf541Q0GGX2 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Znf541Q0GGX2 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
Znf541Q0GGX2 Apbb1-217ENSMUST00000191011 2712 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Znf541Q0GGX2 Trim16-202ENSMUST00000072639 1929 ntTSL 2 BASIC14.01□□□□□ -0.17
Znf541Q0GGX2 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Znf541Q0GGX2 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
Znf541Q0GGX2 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Znf541Q0GGX2 Trh-201ENSMUST00000006046 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Znf541Q0GGX2 Pde6c-202ENSMUST00000112329 2895 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Znf541Q0GGX2 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Znf541Q0GGX2 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Znf541Q0GGX2 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC14.01□□□□□ -0.17
Znf541Q0GGX2 Smarca5-ps-201ENSMUST00000121843 3123 ntBASIC14.01□□□□□ -0.17
Znf541Q0GGX2 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Znf541Q0GGX2 Habp2-201ENSMUST00000078284 2314 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Znf541Q0GGX2 Edn1-201ENSMUST00000021796 2139 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Znf541Q0GGX2 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Znf541Q0GGX2 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Znf541Q0GGX2 Aktip-203ENSMUST00000120349 2153 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Znf541Q0GGX2 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Znf541Q0GGX2 Gm6758-201ENSMUST00000119643 1055 ntBASIC14□□□□□ -0.17
Znf541Q0GGX2 Snrnp25-202ENSMUST00000121182 659 ntAPPRIS ALT2 TSL 3 BASIC14□□□□□ -0.17
Znf541Q0GGX2 Gm22344-201ENSMUST00000122642 278 ntBASIC14□□□□□ -0.17
Znf541Q0GGX2 Gm12426-201ENSMUST00000153083 371 ntTSL 5 BASIC14□□□□□ -0.17
Znf541Q0GGX2 Gm16081-201ENSMUST00000155992 684 ntTSL 3 BASIC14□□□□□ -0.17
Znf541Q0GGX2 Gm4778-202ENSMUST00000159517 1241 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Znf541Q0GGX2 Gm17070-201ENSMUST00000170463 784 ntBASIC14□□□□□ -0.17
Znf541Q0GGX2 Gm20392-201ENSMUST00000173047 701 ntBASIC14□□□□□ -0.17
Znf541Q0GGX2 Dnajc4-202ENSMUST00000179118 840 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Znf541Q0GGX2 Gm5543-201ENSMUST00000193329 1091 ntBASIC14□□□□□ -0.17
Znf541Q0GGX2 Gm37723-201ENSMUST00000194480 565 ntBASIC14□□□□□ -0.17
Znf541Q0GGX2 Gm31557-201ENSMUST00000213825 973 ntTSL 5 BASIC14□□□□□ -0.17
Znf541Q0GGX2 Gm31557-202ENSMUST00000213995 722 ntTSL 5 BASIC14□□□□□ -0.17
Znf541Q0GGX2 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC14□□□□□ -0.17
Znf541Q0GGX2 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Znf541Q0GGX2 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC14□□□□□ -0.17
Znf541Q0GGX2 Gatb-203ENSMUST00000107674 1980 ntTSL 1 (best) BASIC14□□□□□ -0.17
Znf541Q0GGX2 Gm12498-201ENSMUST00000138374 2458 ntTSL 1 (best) BASIC14□□□□□ -0.17
Znf541Q0GGX2 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Znf541Q0GGX2 Cfap161-201ENSMUST00000011298 1335 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Znf541Q0GGX2 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Znf541Q0GGX2 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Znf541Q0GGX2 Ano10-203ENSMUST00000214409 2384 ntTSL 1 (best) BASIC14□□□□□ -0.17
Znf541Q0GGX2 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Znf541Q0GGX2 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Znf541Q0GGX2 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
Znf541Q0GGX2 Olfr463-203ENSMUST00000217095 1977 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Znf541Q0GGX2 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC14□□□□□ -0.17
Znf541Q0GGX2 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Znf541Q0GGX2 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Znf541Q0GGX2 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Znf541Q0GGX2 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Znf541Q0GGX2 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC13.99□□□□□ -0.17
Znf541Q0GGX2 Gm17151-201ENSMUST00000105760 367 ntTSL 3 BASIC13.99□□□□□ -0.17
Znf541Q0GGX2 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
Znf541Q0GGX2 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Znf541Q0GGX2 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
Znf541Q0GGX2 Kdm6bos-201ENSMUST00000129924 840 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 76 ms