Protein–RNA interactions for Protein: E9PVD3

Dchs1, Protocadherin-16, mousemouse

Predictions only

Length 3,291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dchs1E9PVD3 Pigb-206ENSMUST00000184035 3221 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Dchs1E9PVD3 A930006I01Rik-201ENSMUST00000139065 2229 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Dchs1E9PVD3 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Dchs1E9PVD3 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Dchs1E9PVD3 Ddr1-202ENSMUST00000097333 3593 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Dchs1E9PVD3 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Dchs1E9PVD3 Scgb1b29-201ENSMUST00000108094 282 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Dchs1E9PVD3 Rps23-ps1-201ENSMUST00000116115 425 ntBASIC9.6□□□□□ -0.87
Dchs1E9PVD3 Gm5510-201ENSMUST00000117826 486 ntBASIC9.6□□□□□ -0.87
Dchs1E9PVD3 Gm15476-201ENSMUST00000118247 1191 ntBASIC9.6□□□□□ -0.87
Dchs1E9PVD3 Gm12207-201ENSMUST00000143016 494 ntTSL 2 BASIC9.6□□□□□ -0.87
Dchs1E9PVD3 Gm15221-201ENSMUST00000144439 414 ntTSL 3 BASIC9.6□□□□□ -0.87
Dchs1E9PVD3 Rps23-ps2-201ENSMUST00000146939 432 ntBASIC9.6□□□□□ -0.87
Dchs1E9PVD3 Gm25694-201ENSMUST00000175448 282 ntBASIC9.6□□□□□ -0.87
Dchs1E9PVD3 Olfr1248-201ENSMUST00000216129 1078 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Dchs1E9PVD3 Gm6713-201ENSMUST00000216137 1446 ntBASIC9.6□□□□□ -0.87
Dchs1E9PVD3 Armcx3-203ENSMUST00000086884 3488 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Dchs1E9PVD3 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Dchs1E9PVD3 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Dchs1E9PVD3 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC9.6□□□□□ -0.87
Dchs1E9PVD3 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Dchs1E9PVD3 Nr1h4-203ENSMUST00000105297 2013 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Dchs1E9PVD3 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Dchs1E9PVD3 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
Dchs1E9PVD3 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Dchs1E9PVD3 Gm15965-201ENSMUST00000123318 1428 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Dchs1E9PVD3 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
Dchs1E9PVD3 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC9.59□□□□□ -0.87
Dchs1E9PVD3 Ormdl2-203ENSMUST00000219215 1051 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Dchs1E9PVD3 Gm34667-201ENSMUST00000222974 1258 ntTSL 5 BASIC9.59□□□□□ -0.87
Dchs1E9PVD3 Tff3-201ENSMUST00000024827 493 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Dchs1E9PVD3 Rdh11-201ENSMUST00000085254 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Dchs1E9PVD3 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
Dchs1E9PVD3 Gm42962-201ENSMUST00000201966 2325 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Dchs1E9PVD3 C530005A16Rik-201ENSMUST00000142815 2436 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Dchs1E9PVD3 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Dchs1E9PVD3 Eif2s2-201ENSMUST00000099173 2542 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Dchs1E9PVD3 Faf2-201ENSMUST00000026991 1748 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Dchs1E9PVD3 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Dchs1E9PVD3 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Dchs1E9PVD3 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Dchs1E9PVD3 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Dchs1E9PVD3 Srrm4-202ENSMUST00000139425 2798 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Dchs1E9PVD3 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Dchs1E9PVD3 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Dchs1E9PVD3 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Dchs1E9PVD3 Igkv3-10-201ENSMUST00000103397 356 ntAPPRIS ALT2 BASIC9.59□□□□□ -0.87
Dchs1E9PVD3 Pxmp4-202ENSMUST00000109703 560 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Dchs1E9PVD3 Prelid3b-203ENSMUST00000120822 622 ntTSL 3 BASIC9.59□□□□□ -0.87
Dchs1E9PVD3 Gm5860-201ENSMUST00000137810 1028 ntTSL 2 BASIC9.59□□□□□ -0.87
Dchs1E9PVD3 Gm16288-201ENSMUST00000137940 367 ntBASIC9.59□□□□□ -0.87
Dchs1E9PVD3 Gm14817-201ENSMUST00000148522 643 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Dchs1E9PVD3 Gm9574-201ENSMUST00000173127 845 ntBASIC9.59□□□□□ -0.87
Dchs1E9PVD3 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC9.59□□□□□ -0.87
Dchs1E9PVD3 Gm28499-201ENSMUST00000191576 666 ntTSL 2 BASIC9.59□□□□□ -0.87
Dchs1E9PVD3 Gm33969-201ENSMUST00000197615 388 ntTSL 3 BASIC9.59□□□□□ -0.87
Dchs1E9PVD3 Hamp2-203ENSMUST00000217812 437 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Dchs1E9PVD3 Kat7-205ENSMUST00000107734 3560 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Dchs1E9PVD3 Cycs-202ENSMUST00000161401 3123 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Dchs1E9PVD3 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Dchs1E9PVD3 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC9.59□□□□□ -0.87
Dchs1E9PVD3 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Dchs1E9PVD3 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Dchs1E9PVD3 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Dchs1E9PVD3 Plac9b-201ENSMUST00000100809 388 ntTSL 2 BASIC9.58□□□□□ -0.88
Dchs1E9PVD3 1700071K01Rik-201ENSMUST00000117522 819 ntBASIC9.58□□□□□ -0.88
Dchs1E9PVD3 Gm13377-201ENSMUST00000137984 683 ntBASIC9.58□□□□□ -0.88
Dchs1E9PVD3 Eef1d-217ENSMUST00000151066 704 ntTSL 5 BASIC9.58□□□□□ -0.88
Dchs1E9PVD3 Rpl17-ps11-201ENSMUST00000161946 729 ntBASIC9.58□□□□□ -0.88
Dchs1E9PVD3 Pttg1ip-208ENSMUST00000162943 721 ntAPPRIS ALT2 TSL 3 BASIC9.58□□□□□ -0.88
Dchs1E9PVD3 Atad3aos-204ENSMUST00000174185 482 ntTSL 3 BASIC9.58□□□□□ -0.88
Dchs1E9PVD3 Gm28053-203ENSMUST00000204408 351 ntAPPRIS P1 TSL 2 BASIC9.58□□□□□ -0.88
Dchs1E9PVD3 Hnrnpc-201ENSMUST00000111610 2847 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Dchs1E9PVD3 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Dchs1E9PVD3 Hnrnpc-202ENSMUST00000164655 2843 ntTSL 5 BASIC9.58□□□□□ -0.88
Dchs1E9PVD3 Dcun1d4-203ENSMUST00000113558 4023 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Dchs1E9PVD3 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Dchs1E9PVD3 Csde1-207ENSMUST00000197827 2671 ntAPPRIS P3 TSL 5 BASIC9.58□□□□□ -0.88
Dchs1E9PVD3 Dcun1d2-206ENSMUST00000203604 2112 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Dchs1E9PVD3 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC9.58□□□□□ -0.88
Dchs1E9PVD3 Tfip11-201ENSMUST00000031288 3560 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Dchs1E9PVD3 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Dchs1E9PVD3 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Dchs1E9PVD3 Gpx6-201ENSMUST00000004453 1340 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Dchs1E9PVD3 Immt-206ENSMUST00000166975 2469 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Dchs1E9PVD3 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Dchs1E9PVD3 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Dchs1E9PVD3 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Dchs1E9PVD3 Gosr2-201ENSMUST00000021329 3266 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Dchs1E9PVD3 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC9.58□□□□□ -0.88
Dchs1E9PVD3 Dhdds-209ENSMUST00000144668 3219 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Dchs1E9PVD3 Gm23908-201ENSMUST00000104599 132 ntBASIC9.58□□□□□ -0.88
Dchs1E9PVD3 Gm37858-201ENSMUST00000192759 1231 ntBASIC9.58□□□□□ -0.88
Dchs1E9PVD3 Gm4866-201ENSMUST00000197408 589 ntBASIC9.58□□□□□ -0.88
Dchs1E9PVD3 Gm40332-201ENSMUST00000199847 938 ntBASIC9.58□□□□□ -0.88
Dchs1E9PVD3 Crip1-206ENSMUST00000200553 516 ntAPPRIS P1 TSL 2 BASIC9.58□□□□□ -0.88
Dchs1E9PVD3 Tmem238l-203ENSMUST00000211300 930 ntAPPRIS P1 TSL 3 BASIC9.58□□□□□ -0.88
Dchs1E9PVD3 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC9.58□□□□□ -0.88
Dchs1E9PVD3 Rce1-203ENSMUST00000224707 1255 ntBASIC9.58□□□□□ -0.88
Dchs1E9PVD3 Gm10254-201ENSMUST00000052888 867 ntBASIC9.58□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms