Protein–RNA interactions for Protein: V9GX31

Gm12728, Peptidyl-prolyl cis-trans isomerase, mousemouse

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12728V9GX31 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gm12728V9GX31 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC16.18■□□□□ 0.18
Gm12728V9GX31 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Gm12728V9GX31 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm12728V9GX31 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm12728V9GX31 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm12728V9GX31 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC16.18■□□□□ 0.18
Gm12728V9GX31 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC16.18■□□□□ 0.18
Gm12728V9GX31 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Gm12728V9GX31 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm12728V9GX31 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm12728V9GX31 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gm12728V9GX31 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Gm12728V9GX31 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gm12728V9GX31 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC16.17■□□□□ 0.18
Gm12728V9GX31 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gm12728V9GX31 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gm12728V9GX31 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Gm12728V9GX31 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
Gm12728V9GX31 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC16.17■□□□□ 0.18
Gm12728V9GX31 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gm12728V9GX31 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gm12728V9GX31 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gm12728V9GX31 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gm12728V9GX31 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gm12728V9GX31 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gm12728V9GX31 Gm4430-201ENSMUST00000192413 1943 ntBASIC16.16■□□□□ 0.18
Gm12728V9GX31 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gm12728V9GX31 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Gm12728V9GX31 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
Gm12728V9GX31 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC16.16■□□□□ 0.18
Gm12728V9GX31 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gm12728V9GX31 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Gm12728V9GX31 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gm12728V9GX31 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Gm12728V9GX31 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC16.16■□□□□ 0.18
Gm12728V9GX31 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm12728V9GX31 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Gm12728V9GX31 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm12728V9GX31 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm12728V9GX31 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm12728V9GX31 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm12728V9GX31 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm12728V9GX31 Gm5067-201ENSMUST00000170449 1009 ntBASIC16.15■□□□□ 0.18
Gm12728V9GX31 Mir6538-201ENSMUST00000183713 110 ntBASIC16.15■□□□□ 0.18
Gm12728V9GX31 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Gm12728V9GX31 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm12728V9GX31 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Gm12728V9GX31 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm12728V9GX31 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm12728V9GX31 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm12728V9GX31 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm12728V9GX31 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
Gm12728V9GX31 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
Gm12728V9GX31 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gm12728V9GX31 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC16.14■□□□□ 0.17
Gm12728V9GX31 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gm12728V9GX31 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC16.14■□□□□ 0.17
Gm12728V9GX31 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC16.14■□□□□ 0.17
Gm12728V9GX31 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gm12728V9GX31 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Gm12728V9GX31 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gm12728V9GX31 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Gm12728V9GX31 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Gm12728V9GX31 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC16.14■□□□□ 0.17
Gm12728V9GX31 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Gm12728V9GX31 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gm12728V9GX31 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm12728V9GX31 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Gm12728V9GX31 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm12728V9GX31 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Gm12728V9GX31 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm12728V9GX31 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm12728V9GX31 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC16.13■□□□□ 0.17
Gm12728V9GX31 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm12728V9GX31 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm12728V9GX31 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm12728V9GX31 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm12728V9GX31 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gm12728V9GX31 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Gm12728V9GX31 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC16.13■□□□□ 0.17
Gm12728V9GX31 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Gm12728V9GX31 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Gm12728V9GX31 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC16.12■□□□□ 0.17
Gm12728V9GX31 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Gm12728V9GX31 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Gm12728V9GX31 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Gm12728V9GX31 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm12728V9GX31 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC16.12■□□□□ 0.17
Gm12728V9GX31 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC16.12■□□□□ 0.17
Gm12728V9GX31 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC16.12■□□□□ 0.17
Gm12728V9GX31 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Gm12728V9GX31 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm12728V9GX31 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm12728V9GX31 Gm37035-201ENSMUST00000194809 2148 ntBASIC16.12■□□□□ 0.17
Gm12728V9GX31 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC16.12■□□□□ 0.17
Gm12728V9GX31 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gm12728V9GX31 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm12728V9GX31 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm12728V9GX31 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms