Protein–RNA interactions for Protein: Q9Z0Y9

Nr1h3, Oxysterols receptor LXR-alpha, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h3Q9Z0Y9 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Nr1h3Q9Z0Y9 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Nr1h3Q9Z0Y9 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Nr1h3Q9Z0Y9 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Nr1h3Q9Z0Y9 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Nr1h3Q9Z0Y9 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Nr1h3Q9Z0Y9 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
Nr1h3Q9Z0Y9 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Nr1h3Q9Z0Y9 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Nr1h3Q9Z0Y9 Gm5874-201ENSMUST00000096101 508 ntBASIC21.94■■□□□ 1.1
Nr1h3Q9Z0Y9 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
Nr1h3Q9Z0Y9 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Nr1h3Q9Z0Y9 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Nr1h3Q9Z0Y9 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Nr1h3Q9Z0Y9 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Nr1h3Q9Z0Y9 Gm12504-201ENSMUST00000120860 2231 ntBASIC21.94■■□□□ 1.1
Nr1h3Q9Z0Y9 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
Nr1h3Q9Z0Y9 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Nr1h3Q9Z0Y9 Gm12251-201ENSMUST00000117893 792 ntBASIC21.93■■□□□ 1.1
Nr1h3Q9Z0Y9 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Nr1h3Q9Z0Y9 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Nr1h3Q9Z0Y9 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Nr1h3Q9Z0Y9 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Nr1h3Q9Z0Y9 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Nr1h3Q9Z0Y9 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC21.93■■□□□ 1.1
Nr1h3Q9Z0Y9 AC164883.3-201ENSMUST00000227396 1774 ntBASIC21.93■■□□□ 1.1
Nr1h3Q9Z0Y9 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Nr1h3Q9Z0Y9 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
Nr1h3Q9Z0Y9 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Nr1h3Q9Z0Y9 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Nr1h3Q9Z0Y9 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Nr1h3Q9Z0Y9 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Nr1h3Q9Z0Y9 Spcs1-204ENSMUST00000226782 949 ntBASIC21.92■■□□□ 1.1
Nr1h3Q9Z0Y9 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Nr1h3Q9Z0Y9 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Nr1h3Q9Z0Y9 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Nr1h3Q9Z0Y9 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Nr1h3Q9Z0Y9 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC21.92■■□□□ 1.1
Nr1h3Q9Z0Y9 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Nr1h3Q9Z0Y9 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC21.91■■□□□ 1.1
Nr1h3Q9Z0Y9 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Nr1h3Q9Z0Y9 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Nr1h3Q9Z0Y9 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Nr1h3Q9Z0Y9 Gm6277-202ENSMUST00000224036 2779 ntBASIC21.91■■□□□ 1.1
Nr1h3Q9Z0Y9 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Nr1h3Q9Z0Y9 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Nr1h3Q9Z0Y9 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC21.91■■□□□ 1.1
Nr1h3Q9Z0Y9 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Nr1h3Q9Z0Y9 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Nr1h3Q9Z0Y9 Gm26833-201ENSMUST00000180899 440 ntBASIC21.91■■□□□ 1.1
Nr1h3Q9Z0Y9 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Nr1h3Q9Z0Y9 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Nr1h3Q9Z0Y9 Gm6085-201ENSMUST00000182774 1470 ntBASIC21.9■■□□□ 1.1
Nr1h3Q9Z0Y9 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Nr1h3Q9Z0Y9 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
Nr1h3Q9Z0Y9 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Nr1h3Q9Z0Y9 Cdc34b-202ENSMUST00000188741 1252 ntBASIC21.9■■□□□ 1.1
Nr1h3Q9Z0Y9 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Nr1h3Q9Z0Y9 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC21.9■■□□□ 1.1
Nr1h3Q9Z0Y9 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Nr1h3Q9Z0Y9 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
Nr1h3Q9Z0Y9 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Nr1h3Q9Z0Y9 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
Nr1h3Q9Z0Y9 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Nr1h3Q9Z0Y9 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Nr1h3Q9Z0Y9 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Nr1h3Q9Z0Y9 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Nr1h3Q9Z0Y9 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Nr1h3Q9Z0Y9 Gm43403-201ENSMUST00000198011 1786 ntBASIC21.89■■□□□ 1.1
Nr1h3Q9Z0Y9 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
Nr1h3Q9Z0Y9 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC21.89■■□□□ 1.09
Nr1h3Q9Z0Y9 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Nr1h3Q9Z0Y9 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Nr1h3Q9Z0Y9 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Nr1h3Q9Z0Y9 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Nr1h3Q9Z0Y9 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
Nr1h3Q9Z0Y9 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC21.89■■□□□ 1.09
Nr1h3Q9Z0Y9 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
Nr1h3Q9Z0Y9 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Nr1h3Q9Z0Y9 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Nr1h3Q9Z0Y9 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
Nr1h3Q9Z0Y9 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Nr1h3Q9Z0Y9 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC21.88■■□□□ 1.09
Nr1h3Q9Z0Y9 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Nr1h3Q9Z0Y9 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Nr1h3Q9Z0Y9 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Nr1h3Q9Z0Y9 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Nr1h3Q9Z0Y9 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC21.87■■□□□ 1.09
Nr1h3Q9Z0Y9 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC21.87■■□□□ 1.09
Nr1h3Q9Z0Y9 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Nr1h3Q9Z0Y9 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Nr1h3Q9Z0Y9 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC21.86■■□□□ 1.09
Nr1h3Q9Z0Y9 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC21.86■■□□□ 1.09
Nr1h3Q9Z0Y9 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC21.86■■□□□ 1.09
Nr1h3Q9Z0Y9 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC21.86■■□□□ 1.09
Nr1h3Q9Z0Y9 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
Nr1h3Q9Z0Y9 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Nr1h3Q9Z0Y9 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Nr1h3Q9Z0Y9 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Nr1h3Q9Z0Y9 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms