Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cldn9Q9Z0S7 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cldn9Q9Z0S7 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cldn9Q9Z0S7 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cldn9Q9Z0S7 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Cldn9Q9Z0S7 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cldn9Q9Z0S7 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cldn9Q9Z0S7 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cldn9Q9Z0S7 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cldn9Q9Z0S7 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cldn9Q9Z0S7 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cldn9Q9Z0S7 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cldn9Q9Z0S7 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cldn9Q9Z0S7 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.46■□□□□ 0.71
Cldn9Q9Z0S7 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
Cldn9Q9Z0S7 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC19.46■□□□□ 0.71
Cldn9Q9Z0S7 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC19.46■□□□□ 0.71
Cldn9Q9Z0S7 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cldn9Q9Z0S7 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Cldn9Q9Z0S7 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cldn9Q9Z0S7 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cldn9Q9Z0S7 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cldn9Q9Z0S7 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Cldn9Q9Z0S7 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Cldn9Q9Z0S7 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cldn9Q9Z0S7 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cldn9Q9Z0S7 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cldn9Q9Z0S7 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Cldn9Q9Z0S7 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Cldn9Q9Z0S7 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Cldn9Q9Z0S7 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC19.45■□□□□ 0.7
Cldn9Q9Z0S7 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Cldn9Q9Z0S7 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
Cldn9Q9Z0S7 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cldn9Q9Z0S7 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Cldn9Q9Z0S7 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cldn9Q9Z0S7 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cldn9Q9Z0S7 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cldn9Q9Z0S7 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cldn9Q9Z0S7 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cldn9Q9Z0S7 Etf1-202ENSMUST00000180351 108 ntBASIC19.44■□□□□ 0.7
Cldn9Q9Z0S7 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC19.44■□□□□ 0.7
Cldn9Q9Z0S7 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cldn9Q9Z0S7 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cldn9Q9Z0S7 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cldn9Q9Z0S7 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cldn9Q9Z0S7 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cldn9Q9Z0S7 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Cldn9Q9Z0S7 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Cldn9Q9Z0S7 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cldn9Q9Z0S7 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cldn9Q9Z0S7 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Cldn9Q9Z0S7 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Cldn9Q9Z0S7 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.43■□□□□ 0.7
Cldn9Q9Z0S7 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cldn9Q9Z0S7 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Cldn9Q9Z0S7 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cldn9Q9Z0S7 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cldn9Q9Z0S7 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cldn9Q9Z0S7 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cldn9Q9Z0S7 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cldn9Q9Z0S7 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cldn9Q9Z0S7 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
Cldn9Q9Z0S7 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cldn9Q9Z0S7 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.42■□□□□ 0.7
Cldn9Q9Z0S7 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cldn9Q9Z0S7 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.42■□□□□ 0.7
Cldn9Q9Z0S7 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cldn9Q9Z0S7 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cldn9Q9Z0S7 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Cldn9Q9Z0S7 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cldn9Q9Z0S7 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cldn9Q9Z0S7 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Cldn9Q9Z0S7 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.41■□□□□ 0.7
Cldn9Q9Z0S7 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cldn9Q9Z0S7 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cldn9Q9Z0S7 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cldn9Q9Z0S7 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cldn9Q9Z0S7 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cldn9Q9Z0S7 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Cldn9Q9Z0S7 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Cldn9Q9Z0S7 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cldn9Q9Z0S7 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cldn9Q9Z0S7 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Cldn9Q9Z0S7 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cldn9Q9Z0S7 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC19.39■□□□□ 0.69
Cldn9Q9Z0S7 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cldn9Q9Z0S7 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Cldn9Q9Z0S7 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cldn9Q9Z0S7 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.39■□□□□ 0.69
Cldn9Q9Z0S7 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Cldn9Q9Z0S7 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Cldn9Q9Z0S7 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cldn9Q9Z0S7 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cldn9Q9Z0S7 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cldn9Q9Z0S7 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cldn9Q9Z0S7 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cldn9Q9Z0S7 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cldn9Q9Z0S7 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cldn9Q9Z0S7 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms