Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
PHF8Q9UPP1 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
PHF8Q9UPP1 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
PHF8Q9UPP1 AC141586.4-201ENST00000624558 1573 ntBASIC31.23■■■□□ 2.59
PHF8Q9UPP1 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC31.23■■■□□ 2.59
PHF8Q9UPP1 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
PHF8Q9UPP1 AC012414.1-201ENST00000556676 535 ntBASIC31.23■■■□□ 2.59
PHF8Q9UPP1 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
PHF8Q9UPP1 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC31.23■■■□□ 2.59
PHF8Q9UPP1 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
PHF8Q9UPP1 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC31.22■■■□□ 2.59
PHF8Q9UPP1 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC31.22■■■□□ 2.59
PHF8Q9UPP1 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
PHF8Q9UPP1 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC31.22■■■□□ 2.59
PHF8Q9UPP1 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC31.22■■■□□ 2.59
PHF8Q9UPP1 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
PHF8Q9UPP1 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
PHF8Q9UPP1 AL161729.1-201ENST00000604104 1402 ntBASIC31.22■■■□□ 2.59
PHF8Q9UPP1 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC31.22■■■□□ 2.59
PHF8Q9UPP1 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
PHF8Q9UPP1 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC31.21■■■□□ 2.59
PHF8Q9UPP1 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC31.21■■■□□ 2.59
PHF8Q9UPP1 CCDC92B-201ENST00000575506 885 ntBASIC31.21■■■□□ 2.59
PHF8Q9UPP1 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC31.21■■■□□ 2.59
PHF8Q9UPP1 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
PHF8Q9UPP1 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC31.2■■■□□ 2.59
PHF8Q9UPP1 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC31.2■■■□□ 2.59
PHF8Q9UPP1 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC31.2■■■□□ 2.58
PHF8Q9UPP1 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC31.2■■■□□ 2.58
PHF8Q9UPP1 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC31.19■■■□□ 2.58
PHF8Q9UPP1 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC31.19■■■□□ 2.58
PHF8Q9UPP1 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC31.19■■■□□ 2.58
PHF8Q9UPP1 ID1-201ENST00000376105 1233 ntBASIC31.19■■■□□ 2.58
PHF8Q9UPP1 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC31.19■■■□□ 2.58
PHF8Q9UPP1 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC31.19■■■□□ 2.58
PHF8Q9UPP1 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC31.19■■■□□ 2.58
PHF8Q9UPP1 CEBPA-AS1-201ENST00000592982 2198 ntBASIC31.19■■■□□ 2.58
PHF8Q9UPP1 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
PHF8Q9UPP1 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
PHF8Q9UPP1 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
PHF8Q9UPP1 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC31.18■■■□□ 2.58
PHF8Q9UPP1 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC31.18■■■□□ 2.58
PHF8Q9UPP1 AL354811.1-201ENST00000610286 706 ntBASIC31.18■■■□□ 2.58
PHF8Q9UPP1 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
PHF8Q9UPP1 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
PHF8Q9UPP1 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC31.17■■■□□ 2.58
PHF8Q9UPP1 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC31.17■■■□□ 2.58
PHF8Q9UPP1 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC31.17■■■□□ 2.58
PHF8Q9UPP1 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
PHF8Q9UPP1 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC31.17■■■□□ 2.58
PHF8Q9UPP1 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
PHF8Q9UPP1 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC31.16■■■□□ 2.58
PHF8Q9UPP1 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC31.16■■■□□ 2.58
PHF8Q9UPP1 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC31.16■■■□□ 2.58
PHF8Q9UPP1 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
PHF8Q9UPP1 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
PHF8Q9UPP1 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC31.15■■■□□ 2.58
PHF8Q9UPP1 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC31.15■■■□□ 2.58
PHF8Q9UPP1 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
PHF8Q9UPP1 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC31.15■■■□□ 2.58
PHF8Q9UPP1 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC31.15■■■□□ 2.58
PHF8Q9UPP1 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC31.15■■■□□ 2.58
PHF8Q9UPP1 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
PHF8Q9UPP1 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC31.15■■■□□ 2.58
PHF8Q9UPP1 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
PHF8Q9UPP1 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
PHF8Q9UPP1 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
PHF8Q9UPP1 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC31.14■■■□□ 2.58
PHF8Q9UPP1 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
PHF8Q9UPP1 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
PHF8Q9UPP1 GXYLT1P2-201ENST00000433312 1230 ntBASIC31.14■■■□□ 2.58
PHF8Q9UPP1 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC31.14■■■□□ 2.58
PHF8Q9UPP1 VPS53-216ENST00000574029 585 ntTSL 4 BASIC31.14■■■□□ 2.58
PHF8Q9UPP1 NTF6G-201ENST00000591094 616 ntBASIC31.14■■■□□ 2.58
PHF8Q9UPP1 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC31.14■■■□□ 2.58
PHF8Q9UPP1 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
PHF8Q9UPP1 DUSP8P4-201ENST00000399538 1761 ntBASIC31.14■■■□□ 2.58
PHF8Q9UPP1 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
PHF8Q9UPP1 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
PHF8Q9UPP1 ALDH1A3-203ENST00000557963 1670 ntBASIC31.13■■■□□ 2.57
PHF8Q9UPP1 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC31.13■■■□□ 2.57
PHF8Q9UPP1 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC31.13■■■□□ 2.57
PHF8Q9UPP1 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC31.13■■■□□ 2.57
PHF8Q9UPP1 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC31.13■■■□□ 2.57
PHF8Q9UPP1 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC31.13■■■□□ 2.57
PHF8Q9UPP1 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
PHF8Q9UPP1 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC31.12■■■□□ 2.57
PHF8Q9UPP1 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
PHF8Q9UPP1 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
PHF8Q9UPP1 AL121749.1-202ENST00000609313 2153 ntBASIC31.12■■■□□ 2.57
PHF8Q9UPP1 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
PHF8Q9UPP1 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
PHF8Q9UPP1 KRT18P14-201ENST00000534205 1250 ntBASIC31.12■■■□□ 2.57
PHF8Q9UPP1 TERF1P2-201ENST00000583350 1212 ntBASIC31.12■■■□□ 2.57
PHF8Q9UPP1 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC31.12■■■□□ 2.57
PHF8Q9UPP1 HLA-L-211ENST00000482052 1765 ntBASIC31.12■■■□□ 2.57
PHF8Q9UPP1 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC31.12■■■□□ 2.57
PHF8Q9UPP1 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
PHF8Q9UPP1 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC31.11■■■□□ 2.57
PHF8Q9UPP1 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC31.11■■■□□ 2.57
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms