Protein–RNA interactions for Protein: Q9R0X5

Rpgr, X-linked retinitis pigmentosa GTPase regulator, mousemouse

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RpgrQ9R0X5 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RpgrQ9R0X5 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RpgrQ9R0X5 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RpgrQ9R0X5 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.38■□□□□ 0.85
RpgrQ9R0X5 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RpgrQ9R0X5 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RpgrQ9R0X5 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC20.37■□□□□ 0.85
RpgrQ9R0X5 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RpgrQ9R0X5 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RpgrQ9R0X5 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
RpgrQ9R0X5 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
RpgrQ9R0X5 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RpgrQ9R0X5 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RpgrQ9R0X5 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RpgrQ9R0X5 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
RpgrQ9R0X5 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC20.36■□□□□ 0.85
RpgrQ9R0X5 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RpgrQ9R0X5 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.36■□□□□ 0.85
RpgrQ9R0X5 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RpgrQ9R0X5 Gm7417-201ENSMUST00000192950 473 ntBASIC20.36■□□□□ 0.85
RpgrQ9R0X5 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.36■□□□□ 0.85
RpgrQ9R0X5 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC20.36■□□□□ 0.85
RpgrQ9R0X5 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RpgrQ9R0X5 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RpgrQ9R0X5 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC20.36■□□□□ 0.85
RpgrQ9R0X5 AC164883.3-201ENSMUST00000227396 1774 ntBASIC20.36■□□□□ 0.85
RpgrQ9R0X5 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RpgrQ9R0X5 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RpgrQ9R0X5 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RpgrQ9R0X5 Gm10620-201ENSMUST00000098379 1332 ntBASIC20.35■□□□□ 0.85
RpgrQ9R0X5 Rps24-207ENSMUST00000224568 714 ntBASIC20.35■□□□□ 0.85
RpgrQ9R0X5 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.35■□□□□ 0.85
RpgrQ9R0X5 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
RpgrQ9R0X5 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.34■□□□□ 0.85
RpgrQ9R0X5 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RpgrQ9R0X5 Etf1-202ENSMUST00000180351 108 ntBASIC20.34■□□□□ 0.85
RpgrQ9R0X5 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RpgrQ9R0X5 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RpgrQ9R0X5 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
RpgrQ9R0X5 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.34■□□□□ 0.85
RpgrQ9R0X5 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RpgrQ9R0X5 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
RpgrQ9R0X5 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RpgrQ9R0X5 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
RpgrQ9R0X5 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RpgrQ9R0X5 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
RpgrQ9R0X5 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
RpgrQ9R0X5 AC093043.1-201ENSMUST00000226700 898 ntBASIC20.33■□□□□ 0.85
RpgrQ9R0X5 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
RpgrQ9R0X5 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RpgrQ9R0X5 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RpgrQ9R0X5 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
RpgrQ9R0X5 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RpgrQ9R0X5 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
RpgrQ9R0X5 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RpgrQ9R0X5 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RpgrQ9R0X5 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RpgrQ9R0X5 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
RpgrQ9R0X5 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
RpgrQ9R0X5 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RpgrQ9R0X5 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
RpgrQ9R0X5 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC20.31■□□□□ 0.84
RpgrQ9R0X5 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC20.31■□□□□ 0.84
RpgrQ9R0X5 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC20.31■□□□□ 0.84
RpgrQ9R0X5 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RpgrQ9R0X5 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RpgrQ9R0X5 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
RpgrQ9R0X5 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RpgrQ9R0X5 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
RpgrQ9R0X5 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC20.3■□□□□ 0.84
RpgrQ9R0X5 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
RpgrQ9R0X5 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RpgrQ9R0X5 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
RpgrQ9R0X5 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC20.3■□□□□ 0.84
RpgrQ9R0X5 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RpgrQ9R0X5 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RpgrQ9R0X5 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RpgrQ9R0X5 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RpgrQ9R0X5 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RpgrQ9R0X5 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
RpgrQ9R0X5 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
RpgrQ9R0X5 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RpgrQ9R0X5 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.29■□□□□ 0.84
RpgrQ9R0X5 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RpgrQ9R0X5 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RpgrQ9R0X5 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RpgrQ9R0X5 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RpgrQ9R0X5 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RpgrQ9R0X5 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RpgrQ9R0X5 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RpgrQ9R0X5 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RpgrQ9R0X5 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC20.28■□□□□ 0.84
RpgrQ9R0X5 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RpgrQ9R0X5 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RpgrQ9R0X5 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RpgrQ9R0X5 Gm45102-201ENSMUST00000207427 857 ntBASIC20.28■□□□□ 0.84
RpgrQ9R0X5 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RpgrQ9R0X5 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
RpgrQ9R0X5 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
RpgrQ9R0X5 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms