Protein–RNA interactions for Protein: Q9R087

Gpc6, Glypican-6, mousemouse

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gpc6Q9R087 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.69■□□□□ 0.58
Gpc6Q9R087 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Gpc6Q9R087 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gpc6Q9R087 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC18.68■□□□□ 0.58
Gpc6Q9R087 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
Gpc6Q9R087 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Gpc6Q9R087 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gpc6Q9R087 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gpc6Q9R087 Gm28536-201ENSMUST00000190971 1317 ntBASIC18.68■□□□□ 0.58
Gpc6Q9R087 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gpc6Q9R087 Gm5913-201ENSMUST00000119397 1399 ntBASIC18.68■□□□□ 0.58
Gpc6Q9R087 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
Gpc6Q9R087 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Gpc6Q9R087 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Gpc6Q9R087 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Gpc6Q9R087 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC18.67■□□□□ 0.58
Gpc6Q9R087 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC18.67■□□□□ 0.58
Gpc6Q9R087 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Gpc6Q9R087 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC18.67■□□□□ 0.58
Gpc6Q9R087 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC18.67■□□□□ 0.58
Gpc6Q9R087 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Gpc6Q9R087 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Gpc6Q9R087 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gpc6Q9R087 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Gpc6Q9R087 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gpc6Q9R087 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gpc6Q9R087 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Gpc6Q9R087 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gpc6Q9R087 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gpc6Q9R087 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gpc6Q9R087 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gpc6Q9R087 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gpc6Q9R087 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gpc6Q9R087 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Gpc6Q9R087 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gpc6Q9R087 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.65■□□□□ 0.58
Gpc6Q9R087 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Gpc6Q9R087 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Gpc6Q9R087 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Gpc6Q9R087 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Gpc6Q9R087 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Gpc6Q9R087 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.65■□□□□ 0.58
Gpc6Q9R087 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Gpc6Q9R087 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Gpc6Q9R087 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Gpc6Q9R087 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Gpc6Q9R087 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Gpc6Q9R087 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Gpc6Q9R087 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Gpc6Q9R087 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Gpc6Q9R087 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Gpc6Q9R087 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Gpc6Q9R087 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Gpc6Q9R087 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Gpc6Q9R087 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Gpc6Q9R087 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Gpc6Q9R087 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gpc6Q9R087 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC18.63■□□□□ 0.57
Gpc6Q9R087 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gpc6Q9R087 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gpc6Q9R087 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gpc6Q9R087 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gpc6Q9R087 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Gpc6Q9R087 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Gpc6Q9R087 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gpc6Q9R087 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gpc6Q9R087 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gpc6Q9R087 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gpc6Q9R087 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gpc6Q9R087 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gpc6Q9R087 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Gpc6Q9R087 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Gpc6Q9R087 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Gpc6Q9R087 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Gpc6Q9R087 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Gpc6Q9R087 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Gpc6Q9R087 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Gpc6Q9R087 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Gpc6Q9R087 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Gpc6Q9R087 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Gpc6Q9R087 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Gpc6Q9R087 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Gpc6Q9R087 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Gpc6Q9R087 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Gpc6Q9R087 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Gpc6Q9R087 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Gpc6Q9R087 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Gpc6Q9R087 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Gpc6Q9R087 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Gpc6Q9R087 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Gpc6Q9R087 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Gpc6Q9R087 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Gpc6Q9R087 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC18.61■□□□□ 0.57
Gpc6Q9R087 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Gpc6Q9R087 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.61■□□□□ 0.57
Gpc6Q9R087 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC18.61■□□□□ 0.57
Gpc6Q9R087 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Gpc6Q9R087 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Gpc6Q9R087 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Gpc6Q9R087 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 126.3 ms