Protein–RNA interactions for Protein: Q9CZQ6

Raet1e, Retinoic acid early-inducible protein 1-epsilon, mousemouse

Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1eQ9CZQ6 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Raet1eQ9CZQ6 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Raet1eQ9CZQ6 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Raet1eQ9CZQ6 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Raet1eQ9CZQ6 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Raet1eQ9CZQ6 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Raet1eQ9CZQ6 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Raet1eQ9CZQ6 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Raet1eQ9CZQ6 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Raet1eQ9CZQ6 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC17.78■□□□□ 0.44
Raet1eQ9CZQ6 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Raet1eQ9CZQ6 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Raet1eQ9CZQ6 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Raet1eQ9CZQ6 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Raet1eQ9CZQ6 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC17.77■□□□□ 0.44
Raet1eQ9CZQ6 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Raet1eQ9CZQ6 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Raet1eQ9CZQ6 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Raet1eQ9CZQ6 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Raet1eQ9CZQ6 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Raet1eQ9CZQ6 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Raet1eQ9CZQ6 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Raet1eQ9CZQ6 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Raet1eQ9CZQ6 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
Raet1eQ9CZQ6 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Raet1eQ9CZQ6 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Raet1eQ9CZQ6 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Raet1eQ9CZQ6 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Raet1eQ9CZQ6 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Raet1eQ9CZQ6 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Raet1eQ9CZQ6 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Raet1eQ9CZQ6 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Raet1eQ9CZQ6 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC17.75■□□□□ 0.43
Raet1eQ9CZQ6 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Raet1eQ9CZQ6 AC151971.4-201ENSMUST00000214717 704 ntBASIC17.75■□□□□ 0.43
Raet1eQ9CZQ6 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Raet1eQ9CZQ6 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Raet1eQ9CZQ6 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Raet1eQ9CZQ6 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Raet1eQ9CZQ6 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Raet1eQ9CZQ6 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Raet1eQ9CZQ6 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Raet1eQ9CZQ6 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Raet1eQ9CZQ6 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Raet1eQ9CZQ6 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Raet1eQ9CZQ6 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Raet1eQ9CZQ6 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Raet1eQ9CZQ6 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Raet1eQ9CZQ6 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Raet1eQ9CZQ6 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Raet1eQ9CZQ6 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Raet1eQ9CZQ6 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Raet1eQ9CZQ6 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Raet1eQ9CZQ6 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Raet1eQ9CZQ6 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Raet1eQ9CZQ6 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Raet1eQ9CZQ6 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Raet1eQ9CZQ6 Gm6311-201ENSMUST00000073790 878 ntBASIC17.72■□□□□ 0.43
Raet1eQ9CZQ6 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Raet1eQ9CZQ6 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Raet1eQ9CZQ6 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Raet1eQ9CZQ6 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Raet1eQ9CZQ6 Gm43909-201ENSMUST00000203443 1876 ntBASIC17.71■□□□□ 0.43
Raet1eQ9CZQ6 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC17.71■□□□□ 0.43
Raet1eQ9CZQ6 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Raet1eQ9CZQ6 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Raet1eQ9CZQ6 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Raet1eQ9CZQ6 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Raet1eQ9CZQ6 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC17.71■□□□□ 0.43
Raet1eQ9CZQ6 Gm9806-201ENSMUST00000051080 552 ntBASIC17.71■□□□□ 0.43
Raet1eQ9CZQ6 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Raet1eQ9CZQ6 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Raet1eQ9CZQ6 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Raet1eQ9CZQ6 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Raet1eQ9CZQ6 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC17.71■□□□□ 0.42
Raet1eQ9CZQ6 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.42
Raet1eQ9CZQ6 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Raet1eQ9CZQ6 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Raet1eQ9CZQ6 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Raet1eQ9CZQ6 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Raet1eQ9CZQ6 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC17.7■□□□□ 0.42
Raet1eQ9CZQ6 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Raet1eQ9CZQ6 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Raet1eQ9CZQ6 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC17.7■□□□□ 0.42
Raet1eQ9CZQ6 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Raet1eQ9CZQ6 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Raet1eQ9CZQ6 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
Raet1eQ9CZQ6 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Raet1eQ9CZQ6 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Raet1eQ9CZQ6 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Raet1eQ9CZQ6 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Raet1eQ9CZQ6 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Raet1eQ9CZQ6 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Raet1eQ9CZQ6 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Raet1eQ9CZQ6 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Raet1eQ9CZQ6 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Raet1eQ9CZQ6 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Raet1eQ9CZQ6 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC17.69■□□□□ 0.42
Raet1eQ9CZQ6 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
Raet1eQ9CZQ6 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms