Protein–RNA interactions for Protein: Q9CQS8

Sec61b, Protein transport protein Sec61 subunit beta, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61bQ9CQS8 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sec61bQ9CQS8 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sec61bQ9CQS8 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC10.83□□□□□ -0.68
Sec61bQ9CQS8 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sec61bQ9CQS8 Gm26833-201ENSMUST00000180899 440 ntBASIC10.83□□□□□ -0.68
Sec61bQ9CQS8 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sec61bQ9CQS8 Slc35b2-207ENSMUST00000226086 850 ntBASIC10.83□□□□□ -0.68
Sec61bQ9CQS8 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC10.83□□□□□ -0.68
Sec61bQ9CQS8 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC10.83□□□□□ -0.68
Sec61bQ9CQS8 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sec61bQ9CQS8 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sec61bQ9CQS8 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Sec61bQ9CQS8 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sec61bQ9CQS8 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sec61bQ9CQS8 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sec61bQ9CQS8 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sec61bQ9CQS8 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sec61bQ9CQS8 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC10.82□□□□□ -0.68
Sec61bQ9CQS8 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sec61bQ9CQS8 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sec61bQ9CQS8 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sec61bQ9CQS8 Gm5874-201ENSMUST00000096101 508 ntBASIC10.82□□□□□ -0.68
Sec61bQ9CQS8 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC10.82□□□□□ -0.68
Sec61bQ9CQS8 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC10.82□□□□□ -0.68
Sec61bQ9CQS8 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Sec61bQ9CQS8 Il17rd-202ENSMUST00000223942 2186 ntBASIC10.82□□□□□ -0.68
Sec61bQ9CQS8 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sec61bQ9CQS8 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Sec61bQ9CQS8 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Sec61bQ9CQS8 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sec61bQ9CQS8 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sec61bQ9CQS8 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Sec61bQ9CQS8 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sec61bQ9CQS8 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC10.81□□□□□ -0.68
Sec61bQ9CQS8 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC10.81□□□□□ -0.68
Sec61bQ9CQS8 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
Sec61bQ9CQS8 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Sec61bQ9CQS8 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Sec61bQ9CQS8 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sec61bQ9CQS8 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Sec61bQ9CQS8 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sec61bQ9CQS8 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Sec61bQ9CQS8 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sec61bQ9CQS8 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sec61bQ9CQS8 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sec61bQ9CQS8 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sec61bQ9CQS8 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sec61bQ9CQS8 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Sec61bQ9CQS8 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sec61bQ9CQS8 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Sec61bQ9CQS8 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC10.8□□□□□ -0.68
Sec61bQ9CQS8 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Sec61bQ9CQS8 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC10.8□□□□□ -0.68
Sec61bQ9CQS8 Cdc34b-202ENSMUST00000188741 1252 ntBASIC10.8□□□□□ -0.68
Sec61bQ9CQS8 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sec61bQ9CQS8 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Sec61bQ9CQS8 Spcs1-204ENSMUST00000226782 949 ntBASIC10.8□□□□□ -0.68
Sec61bQ9CQS8 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sec61bQ9CQS8 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Sec61bQ9CQS8 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Sec61bQ9CQS8 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sec61bQ9CQS8 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Sec61bQ9CQS8 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sec61bQ9CQS8 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Sec61bQ9CQS8 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sec61bQ9CQS8 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Sec61bQ9CQS8 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Sec61bQ9CQS8 Gm43060-201ENSMUST00000200621 289 ntBASIC10.79□□□□□ -0.68
Sec61bQ9CQS8 Gm43173-201ENSMUST00000202246 593 ntBASIC10.79□□□□□ -0.68
Sec61bQ9CQS8 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sec61bQ9CQS8 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Sec61bQ9CQS8 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sec61bQ9CQS8 AC164883.3-201ENSMUST00000227396 1774 ntBASIC10.79□□□□□ -0.68
Sec61bQ9CQS8 AC115037.1-201ENSMUST00000223391 2173 ntBASIC10.79□□□□□ -0.68
Sec61bQ9CQS8 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sec61bQ9CQS8 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Sec61bQ9CQS8 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sec61bQ9CQS8 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sec61bQ9CQS8 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sec61bQ9CQS8 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Sec61bQ9CQS8 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Sec61bQ9CQS8 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sec61bQ9CQS8 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Sec61bQ9CQS8 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Sec61bQ9CQS8 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sec61bQ9CQS8 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sec61bQ9CQS8 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sec61bQ9CQS8 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Sec61bQ9CQS8 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Sec61bQ9CQS8 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Sec61bQ9CQS8 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC10.78□□□□□ -0.68
Sec61bQ9CQS8 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sec61bQ9CQS8 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Sec61bQ9CQS8 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Sec61bQ9CQS8 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.68
Sec61bQ9CQS8 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Sec61bQ9CQS8 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC10.77□□□□□ -0.68
Sec61bQ9CQS8 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Sec61bQ9CQS8 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Sec61bQ9CQS8 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC10.77□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 117 ms