Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Nkx6-1Q99MA9 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Nkx6-1Q99MA9 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Nkx6-1Q99MA9 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Nkx6-1Q99MA9 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Nkx6-1Q99MA9 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Nkx6-1Q99MA9 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Nkx6-1Q99MA9 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Nkx6-1Q99MA9 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Nkx6-1Q99MA9 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Nkx6-1Q99MA9 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC19.02■□□□□ 0.64
Nkx6-1Q99MA9 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Nkx6-1Q99MA9 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Nkx6-1Q99MA9 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nkx6-1Q99MA9 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Nkx6-1Q99MA9 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Nkx6-1Q99MA9 Gm9988-201ENSMUST00000069786 435 ntBASIC19.01■□□□□ 0.63
Nkx6-1Q99MA9 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nkx6-1Q99MA9 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nkx6-1Q99MA9 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Nkx6-1Q99MA9 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Nkx6-1Q99MA9 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC19■□□□□ 0.63
Nkx6-1Q99MA9 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Nkx6-1Q99MA9 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC19■□□□□ 0.63
Nkx6-1Q99MA9 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Nkx6-1Q99MA9 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC19■□□□□ 0.63
Nkx6-1Q99MA9 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC19■□□□□ 0.63
Nkx6-1Q99MA9 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC19■□□□□ 0.63
Nkx6-1Q99MA9 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19■□□□□ 0.63
Nkx6-1Q99MA9 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nkx6-1Q99MA9 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Nkx6-1Q99MA9 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Nkx6-1Q99MA9 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nkx6-1Q99MA9 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nkx6-1Q99MA9 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Nkx6-1Q99MA9 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nkx6-1Q99MA9 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Nkx6-1Q99MA9 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nkx6-1Q99MA9 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nkx6-1Q99MA9 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Nkx6-1Q99MA9 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nkx6-1Q99MA9 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nkx6-1Q99MA9 Gm12933-201ENSMUST00000120203 872 ntBASIC18.98■□□□□ 0.63
Nkx6-1Q99MA9 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Nkx6-1Q99MA9 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nkx6-1Q99MA9 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nkx6-1Q99MA9 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nkx6-1Q99MA9 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC18.97■□□□□ 0.63
Nkx6-1Q99MA9 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Nkx6-1Q99MA9 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nkx6-1Q99MA9 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nkx6-1Q99MA9 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Nkx6-1Q99MA9 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nkx6-1Q99MA9 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nkx6-1Q99MA9 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
Nkx6-1Q99MA9 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC18.97■□□□□ 0.63
Nkx6-1Q99MA9 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC18.97■□□□□ 0.63
Nkx6-1Q99MA9 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Nkx6-1Q99MA9 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC18.97■□□□□ 0.63
Nkx6-1Q99MA9 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nkx6-1Q99MA9 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Nkx6-1Q99MA9 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nkx6-1Q99MA9 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC18.97■□□□□ 0.63
Nkx6-1Q99MA9 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Nkx6-1Q99MA9 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Nkx6-1Q99MA9 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nkx6-1Q99MA9 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nkx6-1Q99MA9 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Nkx6-1Q99MA9 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nkx6-1Q99MA9 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Nkx6-1Q99MA9 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nkx6-1Q99MA9 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC18.96■□□□□ 0.63
Nkx6-1Q99MA9 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC18.96■□□□□ 0.63
Nkx6-1Q99MA9 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC18.96■□□□□ 0.63
Nkx6-1Q99MA9 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nkx6-1Q99MA9 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nkx6-1Q99MA9 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nkx6-1Q99MA9 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC18.95■□□□□ 0.62
Nkx6-1Q99MA9 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Nkx6-1Q99MA9 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Nkx6-1Q99MA9 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC18.95■□□□□ 0.62
Nkx6-1Q99MA9 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Nkx6-1Q99MA9 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC18.95■□□□□ 0.62
Nkx6-1Q99MA9 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nkx6-1Q99MA9 Gm17641-201ENSMUST00000166328 2350 ntBASIC18.95■□□□□ 0.62
Nkx6-1Q99MA9 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Nkx6-1Q99MA9 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Nkx6-1Q99MA9 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Nkx6-1Q99MA9 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Nkx6-1Q99MA9 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nkx6-1Q99MA9 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nkx6-1Q99MA9 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nkx6-1Q99MA9 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nkx6-1Q99MA9 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nkx6-1Q99MA9 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
Nkx6-1Q99MA9 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Nkx6-1Q99MA9 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nkx6-1Q99MA9 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nkx6-1Q99MA9 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nkx6-1Q99MA9 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC18.93■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms