Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Chmp1b1Q99LU0 Gm5131-201ENSMUST00000212776 1238 ntBASIC18.99■□□□□ 0.63
Chmp1b1Q99LU0 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC18.99■□□□□ 0.63
Chmp1b1Q99LU0 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chmp1b1Q99LU0 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Chmp1b1Q99LU0 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Chmp1b1Q99LU0 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Chmp1b1Q99LU0 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Chmp1b1Q99LU0 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Chmp1b1Q99LU0 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Chmp1b1Q99LU0 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC18.98■□□□□ 0.63
Chmp1b1Q99LU0 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Chmp1b1Q99LU0 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Chmp1b1Q99LU0 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Chmp1b1Q99LU0 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Chmp1b1Q99LU0 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Chmp1b1Q99LU0 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Chmp1b1Q99LU0 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chmp1b1Q99LU0 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chmp1b1Q99LU0 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chmp1b1Q99LU0 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC18.97■□□□□ 0.63
Chmp1b1Q99LU0 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chmp1b1Q99LU0 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chmp1b1Q99LU0 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chmp1b1Q99LU0 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC18.97■□□□□ 0.63
Chmp1b1Q99LU0 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC18.97■□□□□ 0.63
Chmp1b1Q99LU0 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC18.97■□□□□ 0.63
Chmp1b1Q99LU0 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
Chmp1b1Q99LU0 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Chmp1b1Q99LU0 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Chmp1b1Q99LU0 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chmp1b1Q99LU0 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chmp1b1Q99LU0 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Chmp1b1Q99LU0 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Chmp1b1Q99LU0 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Chmp1b1Q99LU0 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Chmp1b1Q99LU0 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Chmp1b1Q99LU0 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Chmp1b1Q99LU0 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Chmp1b1Q99LU0 Gm7417-201ENSMUST00000192950 473 ntBASIC18.96■□□□□ 0.63
Chmp1b1Q99LU0 Gm45102-201ENSMUST00000207427 857 ntBASIC18.96■□□□□ 0.63
Chmp1b1Q99LU0 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC18.96■□□□□ 0.63
Chmp1b1Q99LU0 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Chmp1b1Q99LU0 Gm9959-201ENSMUST00000068277 390 ntBASIC18.96■□□□□ 0.63
Chmp1b1Q99LU0 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Chmp1b1Q99LU0 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Chmp1b1Q99LU0 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.95■□□□□ 0.62
Chmp1b1Q99LU0 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Chmp1b1Q99LU0 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chmp1b1Q99LU0 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chmp1b1Q99LU0 Gm14117-201ENSMUST00000122417 843 ntBASIC18.95■□□□□ 0.62
Chmp1b1Q99LU0 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC18.95■□□□□ 0.62
Chmp1b1Q99LU0 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC18.95■□□□□ 0.62
Chmp1b1Q99LU0 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Chmp1b1Q99LU0 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chmp1b1Q99LU0 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chmp1b1Q99LU0 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chmp1b1Q99LU0 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC18.95■□□□□ 0.62
Chmp1b1Q99LU0 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Chmp1b1Q99LU0 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Chmp1b1Q99LU0 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Chmp1b1Q99LU0 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Chmp1b1Q99LU0 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC18.94■□□□□ 0.62
Chmp1b1Q99LU0 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Chmp1b1Q99LU0 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Chmp1b1Q99LU0 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC18.94■□□□□ 0.62
Chmp1b1Q99LU0 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC18.94■□□□□ 0.62
Chmp1b1Q99LU0 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Chmp1b1Q99LU0 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Chmp1b1Q99LU0 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Chmp1b1Q99LU0 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chmp1b1Q99LU0 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chmp1b1Q99LU0 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC18.93■□□□□ 0.62
Chmp1b1Q99LU0 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Chmp1b1Q99LU0 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chmp1b1Q99LU0 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chmp1b1Q99LU0 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chmp1b1Q99LU0 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chmp1b1Q99LU0 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Chmp1b1Q99LU0 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Chmp1b1Q99LU0 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Chmp1b1Q99LU0 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
Chmp1b1Q99LU0 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Chmp1b1Q99LU0 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC18.92■□□□□ 0.62
Chmp1b1Q99LU0 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Chmp1b1Q99LU0 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Chmp1b1Q99LU0 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Chmp1b1Q99LU0 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Chmp1b1Q99LU0 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Chmp1b1Q99LU0 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Chmp1b1Q99LU0 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC18.91■□□□□ 0.62
Chmp1b1Q99LU0 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.91■□□□□ 0.62
Chmp1b1Q99LU0 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Chmp1b1Q99LU0 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC18.91■□□□□ 0.62
Chmp1b1Q99LU0 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Chmp1b1Q99LU0 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Chmp1b1Q99LU0 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Chmp1b1Q99LU0 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Chmp1b1Q99LU0 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Chmp1b1Q99LU0 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 104.3 ms