Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhga11Q91XY8 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.44■□□□□ 0.7
Pcdhga11Q91XY8 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhga11Q91XY8 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.43■□□□□ 0.7
Pcdhga11Q91XY8 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhga11Q91XY8 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhga11Q91XY8 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Pcdhga11Q91XY8 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhga11Q91XY8 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhga11Q91XY8 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhga11Q91XY8 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhga11Q91XY8 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Pcdhga11Q91XY8 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhga11Q91XY8 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhga11Q91XY8 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.42■□□□□ 0.7
Pcdhga11Q91XY8 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhga11Q91XY8 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.42■□□□□ 0.7
Pcdhga11Q91XY8 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhga11Q91XY8 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Pcdhga11Q91XY8 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC19.42■□□□□ 0.7
Pcdhga11Q91XY8 Gm45102-201ENSMUST00000207427 857 ntBASIC19.42■□□□□ 0.7
Pcdhga11Q91XY8 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhga11Q91XY8 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
Pcdhga11Q91XY8 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhga11Q91XY8 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhga11Q91XY8 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhga11Q91XY8 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhga11Q91XY8 Gm43182-201ENSMUST00000199476 2528 ntBASIC19.42■□□□□ 0.7
Pcdhga11Q91XY8 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhga11Q91XY8 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhga11Q91XY8 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhga11Q91XY8 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhga11Q91XY8 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhga11Q91XY8 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC19.41■□□□□ 0.7
Pcdhga11Q91XY8 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC19.41■□□□□ 0.7
Pcdhga11Q91XY8 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC19.41■□□□□ 0.7
Pcdhga11Q91XY8 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhga11Q91XY8 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhga11Q91XY8 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhga11Q91XY8 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.4■□□□□ 0.7
Pcdhga11Q91XY8 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhga11Q91XY8 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhga11Q91XY8 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Pcdhga11Q91XY8 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Pcdhga11Q91XY8 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhga11Q91XY8 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Pcdhga11Q91XY8 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhga11Q91XY8 Gm14117-201ENSMUST00000122417 843 ntBASIC19.39■□□□□ 0.69
Pcdhga11Q91XY8 Gm5131-201ENSMUST00000212776 1238 ntBASIC19.39■□□□□ 0.69
Pcdhga11Q91XY8 Gm40881-201ENSMUST00000223397 166 ntBASIC19.39■□□□□ 0.69
Pcdhga11Q91XY8 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC19.39■□□□□ 0.69
Pcdhga11Q91XY8 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Pcdhga11Q91XY8 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhga11Q91XY8 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhga11Q91XY8 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Pcdhga11Q91XY8 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC19.38■□□□□ 0.69
Pcdhga11Q91XY8 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhga11Q91XY8 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhga11Q91XY8 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhga11Q91XY8 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhga11Q91XY8 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhga11Q91XY8 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhga11Q91XY8 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhga11Q91XY8 Gm9959-201ENSMUST00000068277 390 ntBASIC19.38■□□□□ 0.69
Pcdhga11Q91XY8 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhga11Q91XY8 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhga11Q91XY8 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Pcdhga11Q91XY8 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.37■□□□□ 0.69
Pcdhga11Q91XY8 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.37■□□□□ 0.69
Pcdhga11Q91XY8 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhga11Q91XY8 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.37■□□□□ 0.69
Pcdhga11Q91XY8 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhga11Q91XY8 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhga11Q91XY8 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhga11Q91XY8 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhga11Q91XY8 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhga11Q91XY8 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhga11Q91XY8 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC19.36■□□□□ 0.69
Pcdhga11Q91XY8 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Pcdhga11Q91XY8 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Pcdhga11Q91XY8 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhga11Q91XY8 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhga11Q91XY8 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhga11Q91XY8 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC19.35■□□□□ 0.69
Pcdhga11Q91XY8 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhga11Q91XY8 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Pcdhga11Q91XY8 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhga11Q91XY8 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.35■□□□□ 0.69
Pcdhga11Q91XY8 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC19.35■□□□□ 0.69
Pcdhga11Q91XY8 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhga11Q91XY8 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhga11Q91XY8 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhga11Q91XY8 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Pcdhga11Q91XY8 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhga11Q91XY8 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhga11Q91XY8 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.34■□□□□ 0.69
Pcdhga11Q91XY8 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhga11Q91XY8 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC19.34■□□□□ 0.69
Pcdhga11Q91XY8 Gm7143-201ENSMUST00000222811 859 ntBASIC19.34■□□□□ 0.69
Pcdhga11Q91XY8 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms