Protein–RNA interactions for Protein: Q8VEE1

Lmcd1, LIM and cysteine-rich domains protein 1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmcd1Q8VEE1 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC21.75■■□□□ 1.07
Lmcd1Q8VEE1 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Lmcd1Q8VEE1 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Lmcd1Q8VEE1 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Lmcd1Q8VEE1 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
Lmcd1Q8VEE1 Gm27045-201ENSMUST00000182145 1402 ntBASIC21.74■■□□□ 1.07
Lmcd1Q8VEE1 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Lmcd1Q8VEE1 Gm3807-201ENSMUST00000193520 1168 ntBASIC21.74■■□□□ 1.07
Lmcd1Q8VEE1 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC21.74■■□□□ 1.07
Lmcd1Q8VEE1 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Lmcd1Q8VEE1 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Lmcd1Q8VEE1 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Lmcd1Q8VEE1 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Lmcd1Q8VEE1 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Lmcd1Q8VEE1 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Lmcd1Q8VEE1 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC21.73■■□□□ 1.07
Lmcd1Q8VEE1 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Lmcd1Q8VEE1 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Lmcd1Q8VEE1 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Lmcd1Q8VEE1 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Lmcd1Q8VEE1 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Lmcd1Q8VEE1 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC21.72■■□□□ 1.07
Lmcd1Q8VEE1 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Lmcd1Q8VEE1 Gm7514-201ENSMUST00000209475 934 ntBASIC21.72■■□□□ 1.07
Lmcd1Q8VEE1 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Lmcd1Q8VEE1 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Lmcd1Q8VEE1 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Lmcd1Q8VEE1 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Lmcd1Q8VEE1 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Lmcd1Q8VEE1 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC21.71■■□□□ 1.07
Lmcd1Q8VEE1 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Lmcd1Q8VEE1 Gm7977-201ENSMUST00000193787 748 ntBASIC21.71■■□□□ 1.07
Lmcd1Q8VEE1 AC158538.1-201ENSMUST00000225870 294 ntBASIC21.71■■□□□ 1.07
Lmcd1Q8VEE1 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
Lmcd1Q8VEE1 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Lmcd1Q8VEE1 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Lmcd1Q8VEE1 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC21.7■■□□□ 1.07
Lmcd1Q8VEE1 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Lmcd1Q8VEE1 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC21.7■■□□□ 1.07
Lmcd1Q8VEE1 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC21.7■■□□□ 1.06
Lmcd1Q8VEE1 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC21.7■■□□□ 1.06
Lmcd1Q8VEE1 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Lmcd1Q8VEE1 Gm12527-201ENSMUST00000117967 564 ntBASIC21.7■■□□□ 1.06
Lmcd1Q8VEE1 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
Lmcd1Q8VEE1 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Lmcd1Q8VEE1 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Lmcd1Q8VEE1 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Lmcd1Q8VEE1 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Lmcd1Q8VEE1 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Lmcd1Q8VEE1 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
Lmcd1Q8VEE1 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC21.69■■□□□ 1.06
Lmcd1Q8VEE1 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Lmcd1Q8VEE1 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Lmcd1Q8VEE1 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Lmcd1Q8VEE1 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC21.69■■□□□ 1.06
Lmcd1Q8VEE1 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC21.69■■□□□ 1.06
Lmcd1Q8VEE1 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Lmcd1Q8VEE1 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Lmcd1Q8VEE1 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Lmcd1Q8VEE1 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Lmcd1Q8VEE1 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC21.69■■□□□ 1.06
Lmcd1Q8VEE1 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Lmcd1Q8VEE1 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Lmcd1Q8VEE1 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Lmcd1Q8VEE1 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
Lmcd1Q8VEE1 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC21.68■■□□□ 1.06
Lmcd1Q8VEE1 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Lmcd1Q8VEE1 Gm42555-201ENSMUST00000199304 1039 ntBASIC21.68■■□□□ 1.06
Lmcd1Q8VEE1 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Lmcd1Q8VEE1 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC21.68■■□□□ 1.06
Lmcd1Q8VEE1 Reep4-203ENSMUST00000226563 1444 ntBASIC21.68■■□□□ 1.06
Lmcd1Q8VEE1 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Lmcd1Q8VEE1 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Lmcd1Q8VEE1 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Lmcd1Q8VEE1 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Lmcd1Q8VEE1 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Lmcd1Q8VEE1 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Lmcd1Q8VEE1 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Lmcd1Q8VEE1 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Lmcd1Q8VEE1 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Lmcd1Q8VEE1 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Lmcd1Q8VEE1 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Lmcd1Q8VEE1 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Lmcd1Q8VEE1 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Lmcd1Q8VEE1 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Lmcd1Q8VEE1 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC21.66■■□□□ 1.06
Lmcd1Q8VEE1 Ap3s1-204ENSMUST00000225520 957 ntBASIC21.66■■□□□ 1.06
Lmcd1Q8VEE1 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Lmcd1Q8VEE1 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Lmcd1Q8VEE1 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Lmcd1Q8VEE1 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Lmcd1Q8VEE1 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Lmcd1Q8VEE1 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Lmcd1Q8VEE1 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Lmcd1Q8VEE1 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Lmcd1Q8VEE1 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
Lmcd1Q8VEE1 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC21.64■■□□□ 1.05
Lmcd1Q8VEE1 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Lmcd1Q8VEE1 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Lmcd1Q8VEE1 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms