Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cystm1Q8K353 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cystm1Q8K353 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cystm1Q8K353 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Cystm1Q8K353 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cystm1Q8K353 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Cystm1Q8K353 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cystm1Q8K353 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cystm1Q8K353 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cystm1Q8K353 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
Cystm1Q8K353 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cystm1Q8K353 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cystm1Q8K353 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cystm1Q8K353 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cystm1Q8K353 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC12.62□□□□□ -0.39
Cystm1Q8K353 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC12.62□□□□□ -0.39
Cystm1Q8K353 Gm5921-201ENSMUST00000075898 882 ntBASIC12.62□□□□□ -0.39
Cystm1Q8K353 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cystm1Q8K353 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC12.62□□□□□ -0.39
Cystm1Q8K353 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cystm1Q8K353 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cystm1Q8K353 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Cystm1Q8K353 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cystm1Q8K353 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cystm1Q8K353 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cystm1Q8K353 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Cystm1Q8K353 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cystm1Q8K353 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
Cystm1Q8K353 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC12.61□□□□□ -0.39
Cystm1Q8K353 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cystm1Q8K353 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Cystm1Q8K353 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cystm1Q8K353 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cystm1Q8K353 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cystm1Q8K353 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cystm1Q8K353 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cystm1Q8K353 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cystm1Q8K353 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cystm1Q8K353 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cystm1Q8K353 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cystm1Q8K353 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC12.61□□□□□ -0.39
Cystm1Q8K353 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cystm1Q8K353 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cystm1Q8K353 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Cystm1Q8K353 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC12.61□□□□□ -0.39
Cystm1Q8K353 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cystm1Q8K353 Gm45606-201ENSMUST00000209836 2795 ntBASIC12.6□□□□□ -0.39
Cystm1Q8K353 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cystm1Q8K353 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cystm1Q8K353 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cystm1Q8K353 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC12.6□□□□□ -0.39
Cystm1Q8K353 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cystm1Q8K353 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC12.6□□□□□ -0.39
Cystm1Q8K353 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cystm1Q8K353 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cystm1Q8K353 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cystm1Q8K353 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cystm1Q8K353 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cystm1Q8K353 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Cystm1Q8K353 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cystm1Q8K353 Gm5784-201ENSMUST00000179344 2478 ntBASIC12.6□□□□□ -0.39
Cystm1Q8K353 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cystm1Q8K353 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC12.59□□□□□ -0.39
Cystm1Q8K353 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Cystm1Q8K353 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cystm1Q8K353 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cystm1Q8K353 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cystm1Q8K353 AC151971.4-201ENSMUST00000214717 704 ntBASIC12.59□□□□□ -0.39
Cystm1Q8K353 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cystm1Q8K353 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cystm1Q8K353 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cystm1Q8K353 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cystm1Q8K353 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Cystm1Q8K353 Gm43403-201ENSMUST00000198011 1786 ntBASIC12.58□□□□□ -0.39
Cystm1Q8K353 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Cystm1Q8K353 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Cystm1Q8K353 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC12.58□□□□□ -0.39
Cystm1Q8K353 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC12.58□□□□□ -0.39
Cystm1Q8K353 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Cystm1Q8K353 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cystm1Q8K353 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Cystm1Q8K353 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cystm1Q8K353 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cystm1Q8K353 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cystm1Q8K353 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cystm1Q8K353 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cystm1Q8K353 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cystm1Q8K353 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC12.58□□□□□ -0.4
Cystm1Q8K353 Gm22567-201ENSMUST00000175542 342 ntBASIC12.58□□□□□ -0.4
Cystm1Q8K353 AC152827.1-201ENSMUST00000221143 2189 ntBASIC12.58□□□□□ -0.4
Cystm1Q8K353 AC117769.4-201ENSMUST00000225679 685 ntBASIC12.58□□□□□ -0.4
Cystm1Q8K353 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cystm1Q8K353 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cystm1Q8K353 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Cystm1Q8K353 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cystm1Q8K353 Gm35558-201ENSMUST00000222675 2219 ntBASIC12.58□□□□□ -0.4
Cystm1Q8K353 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cystm1Q8K353 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Cystm1Q8K353 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Cystm1Q8K353 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms