Protein–RNA interactions for Protein: Q8CI51

Pdlim5, PDZ and LIM domain protein 5, mousemouse

Known RBP Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5Q8CI51 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pdlim5Q8CI51 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Pdlim5Q8CI51 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pdlim5Q8CI51 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pdlim5Q8CI51 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pdlim5Q8CI51 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pdlim5Q8CI51 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pdlim5Q8CI51 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Pdlim5Q8CI51 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
Pdlim5Q8CI51 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pdlim5Q8CI51 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Pdlim5Q8CI51 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Pdlim5Q8CI51 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pdlim5Q8CI51 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC18.61■□□□□ 0.57
Pdlim5Q8CI51 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC18.61■□□□□ 0.57
Pdlim5Q8CI51 Gm18755-201ENSMUST00000218030 1099 ntBASIC18.61■□□□□ 0.57
Pdlim5Q8CI51 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pdlim5Q8CI51 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC18.61■□□□□ 0.57
Pdlim5Q8CI51 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pdlim5Q8CI51 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Pdlim5Q8CI51 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC18.6■□□□□ 0.57
Pdlim5Q8CI51 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.6■□□□□ 0.57
Pdlim5Q8CI51 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pdlim5Q8CI51 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Pdlim5Q8CI51 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pdlim5Q8CI51 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Pdlim5Q8CI51 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC18.6■□□□□ 0.57
Pdlim5Q8CI51 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pdlim5Q8CI51 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pdlim5Q8CI51 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pdlim5Q8CI51 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pdlim5Q8CI51 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pdlim5Q8CI51 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pdlim5Q8CI51 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
Pdlim5Q8CI51 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pdlim5Q8CI51 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Pdlim5Q8CI51 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pdlim5Q8CI51 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pdlim5Q8CI51 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Pdlim5Q8CI51 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pdlim5Q8CI51 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pdlim5Q8CI51 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Pdlim5Q8CI51 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Pdlim5Q8CI51 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pdlim5Q8CI51 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pdlim5Q8CI51 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pdlim5Q8CI51 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pdlim5Q8CI51 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Pdlim5Q8CI51 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pdlim5Q8CI51 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC18.58■□□□□ 0.56
Pdlim5Q8CI51 Gm5131-201ENSMUST00000212776 1238 ntBASIC18.58■□□□□ 0.56
Pdlim5Q8CI51 Gm40881-201ENSMUST00000223397 166 ntBASIC18.58■□□□□ 0.56
Pdlim5Q8CI51 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pdlim5Q8CI51 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.58■□□□□ 0.56
Pdlim5Q8CI51 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pdlim5Q8CI51 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Pdlim5Q8CI51 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pdlim5Q8CI51 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Pdlim5Q8CI51 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pdlim5Q8CI51 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pdlim5Q8CI51 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pdlim5Q8CI51 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pdlim5Q8CI51 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Pdlim5Q8CI51 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pdlim5Q8CI51 AC124392.1-201ENSMUST00000225172 5324 ntBASIC18.57■□□□□ 0.56
Pdlim5Q8CI51 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
Pdlim5Q8CI51 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pdlim5Q8CI51 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pdlim5Q8CI51 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC18.56■□□□□ 0.56
Pdlim5Q8CI51 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC18.56■□□□□ 0.56
Pdlim5Q8CI51 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pdlim5Q8CI51 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC18.56■□□□□ 0.56
Pdlim5Q8CI51 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pdlim5Q8CI51 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Pdlim5Q8CI51 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pdlim5Q8CI51 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pdlim5Q8CI51 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pdlim5Q8CI51 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pdlim5Q8CI51 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC18.55■□□□□ 0.56
Pdlim5Q8CI51 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Pdlim5Q8CI51 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC18.55■□□□□ 0.56
Pdlim5Q8CI51 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC18.55■□□□□ 0.56
Pdlim5Q8CI51 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pdlim5Q8CI51 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pdlim5Q8CI51 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pdlim5Q8CI51 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Pdlim5Q8CI51 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC18.55■□□□□ 0.56
Pdlim5Q8CI51 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pdlim5Q8CI51 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pdlim5Q8CI51 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pdlim5Q8CI51 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Pdlim5Q8CI51 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pdlim5Q8CI51 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Pdlim5Q8CI51 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pdlim5Q8CI51 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pdlim5Q8CI51 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pdlim5Q8CI51 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
Pdlim5Q8CI51 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pdlim5Q8CI51 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pdlim5Q8CI51 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.54■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 60.4 ms