Protein–RNA interactions for Protein: Q8BUM3

Ptpn7, Tyrosine-protein phosphatase non-receptor type 7, mousemouse

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpn7Q8BUM3 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ptpn7Q8BUM3 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ptpn7Q8BUM3 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Ptpn7Q8BUM3 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ptpn7Q8BUM3 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ptpn7Q8BUM3 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Ptpn7Q8BUM3 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Ptpn7Q8BUM3 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ptpn7Q8BUM3 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ptpn7Q8BUM3 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ptpn7Q8BUM3 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ptpn7Q8BUM3 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ptpn7Q8BUM3 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ptpn7Q8BUM3 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.86■□□□□ 0.61
Ptpn7Q8BUM3 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ptpn7Q8BUM3 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ptpn7Q8BUM3 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ptpn7Q8BUM3 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ptpn7Q8BUM3 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ptpn7Q8BUM3 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ptpn7Q8BUM3 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ptpn7Q8BUM3 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ptpn7Q8BUM3 Gm13238-201ENSMUST00000117655 780 ntBASIC18.86■□□□□ 0.61
Ptpn7Q8BUM3 Gm43566-201ENSMUST00000196851 808 ntBASIC18.86■□□□□ 0.61
Ptpn7Q8BUM3 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Ptpn7Q8BUM3 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ptpn7Q8BUM3 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Ptpn7Q8BUM3 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Ptpn7Q8BUM3 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Ptpn7Q8BUM3 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Ptpn7Q8BUM3 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ptpn7Q8BUM3 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ptpn7Q8BUM3 AC152827.1-201ENSMUST00000221143 2189 ntBASIC18.85■□□□□ 0.61
Ptpn7Q8BUM3 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ptpn7Q8BUM3 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Ptpn7Q8BUM3 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ptpn7Q8BUM3 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ptpn7Q8BUM3 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ptpn7Q8BUM3 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ptpn7Q8BUM3 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC18.85■□□□□ 0.61
Ptpn7Q8BUM3 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ptpn7Q8BUM3 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ptpn7Q8BUM3 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ptpn7Q8BUM3 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ptpn7Q8BUM3 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ptpn7Q8BUM3 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Ptpn7Q8BUM3 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Ptpn7Q8BUM3 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC18.84■□□□□ 0.61
Ptpn7Q8BUM3 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ptpn7Q8BUM3 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Ptpn7Q8BUM3 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ptpn7Q8BUM3 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ptpn7Q8BUM3 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC18.83■□□□□ 0.61
Ptpn7Q8BUM3 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
Ptpn7Q8BUM3 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ptpn7Q8BUM3 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ptpn7Q8BUM3 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Ptpn7Q8BUM3 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ptpn7Q8BUM3 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.83■□□□□ 0.6
Ptpn7Q8BUM3 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ptpn7Q8BUM3 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ptpn7Q8BUM3 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ptpn7Q8BUM3 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ptpn7Q8BUM3 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ptpn7Q8BUM3 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
Ptpn7Q8BUM3 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ptpn7Q8BUM3 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ptpn7Q8BUM3 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.81■□□□□ 0.6
Ptpn7Q8BUM3 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ptpn7Q8BUM3 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC18.81■□□□□ 0.6
Ptpn7Q8BUM3 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ptpn7Q8BUM3 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ptpn7Q8BUM3 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC18.81■□□□□ 0.6
Ptpn7Q8BUM3 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ptpn7Q8BUM3 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ptpn7Q8BUM3 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ptpn7Q8BUM3 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ptpn7Q8BUM3 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC18.8■□□□□ 0.6
Ptpn7Q8BUM3 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Ptpn7Q8BUM3 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ptpn7Q8BUM3 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ptpn7Q8BUM3 Gm10399-202ENSMUST00000202768 748 ntBASIC18.8■□□□□ 0.6
Ptpn7Q8BUM3 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC18.8■□□□□ 0.6
Ptpn7Q8BUM3 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Ptpn7Q8BUM3 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ptpn7Q8BUM3 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.8■□□□□ 0.6
Ptpn7Q8BUM3 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ptpn7Q8BUM3 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.79■□□□□ 0.6
Ptpn7Q8BUM3 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC18.79■□□□□ 0.6
Ptpn7Q8BUM3 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Ptpn7Q8BUM3 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ptpn7Q8BUM3 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ptpn7Q8BUM3 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ptpn7Q8BUM3 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ptpn7Q8BUM3 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ptpn7Q8BUM3 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC18.78■□□□□ 0.6
Ptpn7Q8BUM3 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ptpn7Q8BUM3 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ptpn7Q8BUM3 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC18.78■□□□□ 0.6
Ptpn7Q8BUM3 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms