Protein–RNA interactions for Protein: Q8BR37

Nhlrc1, E3 ubiquitin-protein ligase NHLRC1, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc1Q8BR37 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nhlrc1Q8BR37 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nhlrc1Q8BR37 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Nhlrc1Q8BR37 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Nhlrc1Q8BR37 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Nhlrc1Q8BR37 Gm43530-201ENSMUST00000195920 274 ntBASIC15.62■□□□□ 0.09
Nhlrc1Q8BR37 Gm8493-201ENSMUST00000196881 489 ntBASIC15.62■□□□□ 0.09
Nhlrc1Q8BR37 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Nhlrc1Q8BR37 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Nhlrc1Q8BR37 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Nhlrc1Q8BR37 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Nhlrc1Q8BR37 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Nhlrc1Q8BR37 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Nhlrc1Q8BR37 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC15.61■□□□□ 0.09
Nhlrc1Q8BR37 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Nhlrc1Q8BR37 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Nhlrc1Q8BR37 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Nhlrc1Q8BR37 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Nhlrc1Q8BR37 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Nhlrc1Q8BR37 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Nhlrc1Q8BR37 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Nhlrc1Q8BR37 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Nhlrc1Q8BR37 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Nhlrc1Q8BR37 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Nhlrc1Q8BR37 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Nhlrc1Q8BR37 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Nhlrc1Q8BR37 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Nhlrc1Q8BR37 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Nhlrc1Q8BR37 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Nhlrc1Q8BR37 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Nhlrc1Q8BR37 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
Nhlrc1Q8BR37 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Nhlrc1Q8BR37 Gm43182-201ENSMUST00000199476 2528 ntBASIC15.6■□□□□ 0.09
Nhlrc1Q8BR37 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Nhlrc1Q8BR37 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
Nhlrc1Q8BR37 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Nhlrc1Q8BR37 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Nhlrc1Q8BR37 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Nhlrc1Q8BR37 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Nhlrc1Q8BR37 Gm18284-201ENSMUST00000172604 624 ntBASIC15.6■□□□□ 0.09
Nhlrc1Q8BR37 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC15.6■□□□□ 0.09
Nhlrc1Q8BR37 Gm2011-201ENSMUST00000203124 1263 ntBASIC15.6■□□□□ 0.09
Nhlrc1Q8BR37 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Nhlrc1Q8BR37 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Nhlrc1Q8BR37 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Nhlrc1Q8BR37 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC15.6■□□□□ 0.09
Nhlrc1Q8BR37 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Nhlrc1Q8BR37 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC15.59■□□□□ 0.09
Nhlrc1Q8BR37 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Nhlrc1Q8BR37 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Nhlrc1Q8BR37 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC15.59■□□□□ 0.09
Nhlrc1Q8BR37 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC15.59■□□□□ 0.09
Nhlrc1Q8BR37 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Nhlrc1Q8BR37 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Nhlrc1Q8BR37 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Nhlrc1Q8BR37 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Nhlrc1Q8BR37 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Nhlrc1Q8BR37 AC166356.1-201ENSMUST00000228236 1426 ntBASIC15.59■□□□□ 0.09
Nhlrc1Q8BR37 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Nhlrc1Q8BR37 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Nhlrc1Q8BR37 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Nhlrc1Q8BR37 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC15.58■□□□□ 0.08
Nhlrc1Q8BR37 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC15.58■□□□□ 0.08
Nhlrc1Q8BR37 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Nhlrc1Q8BR37 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Nhlrc1Q8BR37 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Nhlrc1Q8BR37 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Nhlrc1Q8BR37 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Nhlrc1Q8BR37 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Nhlrc1Q8BR37 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Nhlrc1Q8BR37 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Nhlrc1Q8BR37 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Nhlrc1Q8BR37 AC164883.3-201ENSMUST00000227396 1774 ntBASIC15.57■□□□□ 0.08
Nhlrc1Q8BR37 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Nhlrc1Q8BR37 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Nhlrc1Q8BR37 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
Nhlrc1Q8BR37 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Nhlrc1Q8BR37 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Nhlrc1Q8BR37 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Nhlrc1Q8BR37 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Nhlrc1Q8BR37 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Nhlrc1Q8BR37 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC15.57■□□□□ 0.08
Nhlrc1Q8BR37 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Nhlrc1Q8BR37 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Nhlrc1Q8BR37 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
Nhlrc1Q8BR37 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
Nhlrc1Q8BR37 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
Nhlrc1Q8BR37 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Nhlrc1Q8BR37 Gm7160-202ENSMUST00000188519 1027 ntBASIC15.56■□□□□ 0.08
Nhlrc1Q8BR37 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC15.56■□□□□ 0.08
Nhlrc1Q8BR37 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Nhlrc1Q8BR37 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Nhlrc1Q8BR37 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Nhlrc1Q8BR37 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Nhlrc1Q8BR37 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Nhlrc1Q8BR37 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Nhlrc1Q8BR37 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Nhlrc1Q8BR37 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Nhlrc1Q8BR37 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Nhlrc1Q8BR37 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms