Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Smco3Q8BQM7 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smco3Q8BQM7 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC16.63■□□□□ 0.25
Smco3Q8BQM7 Gm5987-201ENSMUST00000196433 1151 ntBASIC16.63■□□□□ 0.25
Smco3Q8BQM7 Gm6311-201ENSMUST00000073790 878 ntBASIC16.63■□□□□ 0.25
Smco3Q8BQM7 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smco3Q8BQM7 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smco3Q8BQM7 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smco3Q8BQM7 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smco3Q8BQM7 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Smco3Q8BQM7 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smco3Q8BQM7 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smco3Q8BQM7 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Smco3Q8BQM7 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smco3Q8BQM7 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smco3Q8BQM7 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smco3Q8BQM7 Gm5913-201ENSMUST00000119397 1399 ntBASIC16.62■□□□□ 0.25
Smco3Q8BQM7 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smco3Q8BQM7 Golph3-202ENSMUST00000226517 2359 ntBASIC16.62■□□□□ 0.25
Smco3Q8BQM7 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smco3Q8BQM7 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smco3Q8BQM7 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smco3Q8BQM7 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC16.61■□□□□ 0.25
Smco3Q8BQM7 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smco3Q8BQM7 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smco3Q8BQM7 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Smco3Q8BQM7 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smco3Q8BQM7 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smco3Q8BQM7 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smco3Q8BQM7 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Smco3Q8BQM7 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smco3Q8BQM7 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smco3Q8BQM7 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smco3Q8BQM7 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Smco3Q8BQM7 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smco3Q8BQM7 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smco3Q8BQM7 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smco3Q8BQM7 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smco3Q8BQM7 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smco3Q8BQM7 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smco3Q8BQM7 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Smco3Q8BQM7 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Smco3Q8BQM7 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smco3Q8BQM7 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Smco3Q8BQM7 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Smco3Q8BQM7 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smco3Q8BQM7 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Smco3Q8BQM7 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Smco3Q8BQM7 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smco3Q8BQM7 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smco3Q8BQM7 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smco3Q8BQM7 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC16.59■□□□□ 0.25
Smco3Q8BQM7 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Smco3Q8BQM7 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Smco3Q8BQM7 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Smco3Q8BQM7 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Smco3Q8BQM7 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Smco3Q8BQM7 Shroom3-211ENSMUST00000225438 5742 ntBASIC16.58■□□□□ 0.24
Smco3Q8BQM7 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Smco3Q8BQM7 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC16.58■□□□□ 0.24
Smco3Q8BQM7 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Smco3Q8BQM7 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Smco3Q8BQM7 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smco3Q8BQM7 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smco3Q8BQM7 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Smco3Q8BQM7 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Smco3Q8BQM7 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Smco3Q8BQM7 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Smco3Q8BQM7 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Smco3Q8BQM7 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Smco3Q8BQM7 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC16.56■□□□□ 0.24
Smco3Q8BQM7 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Smco3Q8BQM7 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC16.56■□□□□ 0.24
Smco3Q8BQM7 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Smco3Q8BQM7 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Smco3Q8BQM7 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Smco3Q8BQM7 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Smco3Q8BQM7 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Smco3Q8BQM7 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Smco3Q8BQM7 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Smco3Q8BQM7 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC16.56■□□□□ 0.24
Smco3Q8BQM7 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Smco3Q8BQM7 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Smco3Q8BQM7 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Smco3Q8BQM7 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Smco3Q8BQM7 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Smco3Q8BQM7 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Smco3Q8BQM7 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC16.55■□□□□ 0.24
Smco3Q8BQM7 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Smco3Q8BQM7 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Smco3Q8BQM7 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Smco3Q8BQM7 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Smco3Q8BQM7 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Smco3Q8BQM7 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Smco3Q8BQM7 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Smco3Q8BQM7 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC16.55■□□□□ 0.24
Smco3Q8BQM7 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Smco3Q8BQM7 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
Smco3Q8BQM7 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Smco3Q8BQM7 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms