Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
Col16a1Q8BLX7 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC27.16■■□□□ 1.94
Col16a1Q8BLX7 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC27.16■■□□□ 1.94
Col16a1Q8BLX7 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Col16a1Q8BLX7 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Col16a1Q8BLX7 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Col16a1Q8BLX7 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Col16a1Q8BLX7 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC27.15■■□□□ 1.94
Col16a1Q8BLX7 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC27.15■■□□□ 1.94
Col16a1Q8BLX7 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Col16a1Q8BLX7 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Col16a1Q8BLX7 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC27.15■■□□□ 1.94
Col16a1Q8BLX7 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC27.14■■□□□ 1.94
Col16a1Q8BLX7 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC27.14■■□□□ 1.94
Col16a1Q8BLX7 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC27.14■■□□□ 1.94
Col16a1Q8BLX7 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC27.14■■□□□ 1.94
Col16a1Q8BLX7 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
Col16a1Q8BLX7 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC27.14■■□□□ 1.93
Col16a1Q8BLX7 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
Col16a1Q8BLX7 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC27.14■■□□□ 1.93
Col16a1Q8BLX7 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Col16a1Q8BLX7 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Col16a1Q8BLX7 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Col16a1Q8BLX7 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
Col16a1Q8BLX7 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Col16a1Q8BLX7 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Col16a1Q8BLX7 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC27.12■■□□□ 1.93
Col16a1Q8BLX7 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC27.12■■□□□ 1.93
Col16a1Q8BLX7 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
Col16a1Q8BLX7 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Col16a1Q8BLX7 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Col16a1Q8BLX7 Gm5913-201ENSMUST00000119397 1399 ntBASIC27.11■■□□□ 1.93
Col16a1Q8BLX7 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC27.11■■□□□ 1.93
Col16a1Q8BLX7 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Col16a1Q8BLX7 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Col16a1Q8BLX7 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC27.1■■□□□ 1.93
Col16a1Q8BLX7 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Col16a1Q8BLX7 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC27.1■■□□□ 1.93
Col16a1Q8BLX7 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC27.09■■□□□ 1.93
Col16a1Q8BLX7 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Col16a1Q8BLX7 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC27.09■■□□□ 1.93
Col16a1Q8BLX7 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC27.09■■□□□ 1.93
Col16a1Q8BLX7 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC27.09■■□□□ 1.93
Col16a1Q8BLX7 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Col16a1Q8BLX7 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC27.09■■□□□ 1.93
Col16a1Q8BLX7 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
Col16a1Q8BLX7 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
Col16a1Q8BLX7 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
Col16a1Q8BLX7 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC27.09■■□□□ 1.93
Col16a1Q8BLX7 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC27.09■■□□□ 1.93
Col16a1Q8BLX7 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC27.09■■□□□ 1.93
Col16a1Q8BLX7 Gm12933-201ENSMUST00000120203 872 ntBASIC27.09■■□□□ 1.93
Col16a1Q8BLX7 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
Col16a1Q8BLX7 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC27.08■■□□□ 1.93
Col16a1Q8BLX7 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Col16a1Q8BLX7 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC27.08■■□□□ 1.93
Col16a1Q8BLX7 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Col16a1Q8BLX7 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
Col16a1Q8BLX7 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Col16a1Q8BLX7 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Col16a1Q8BLX7 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
Col16a1Q8BLX7 Gm11421-201ENSMUST00000122124 294 ntBASIC27.07■■□□□ 1.92
Col16a1Q8BLX7 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC27.07■■□□□ 1.92
Col16a1Q8BLX7 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC27.07■■□□□ 1.92
Col16a1Q8BLX7 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Col16a1Q8BLX7 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
Col16a1Q8BLX7 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC27.06■■□□□ 1.92
Col16a1Q8BLX7 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC27.06■■□□□ 1.92
Col16a1Q8BLX7 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC27.06■■□□□ 1.92
Col16a1Q8BLX7 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC27.06■■□□□ 1.92
Col16a1Q8BLX7 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Col16a1Q8BLX7 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Col16a1Q8BLX7 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
Col16a1Q8BLX7 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC27.05■■□□□ 1.92
Col16a1Q8BLX7 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC27.05■■□□□ 1.92
Col16a1Q8BLX7 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Col16a1Q8BLX7 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC27.05■■□□□ 1.92
Col16a1Q8BLX7 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC27.05■■□□□ 1.92
Col16a1Q8BLX7 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Col16a1Q8BLX7 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Col16a1Q8BLX7 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC27.04■■□□□ 1.92
Col16a1Q8BLX7 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC27.04■■□□□ 1.92
Col16a1Q8BLX7 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
Col16a1Q8BLX7 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC27.04■■□□□ 1.92
Col16a1Q8BLX7 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
Col16a1Q8BLX7 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC27.03■■□□□ 1.92
Col16a1Q8BLX7 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
Col16a1Q8BLX7 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
Col16a1Q8BLX7 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
Col16a1Q8BLX7 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
Col16a1Q8BLX7 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Col16a1Q8BLX7 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Col16a1Q8BLX7 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.92
Col16a1Q8BLX7 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.92
Col16a1Q8BLX7 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC27.01■■□□□ 1.91
Col16a1Q8BLX7 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Col16a1Q8BLX7 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Col16a1Q8BLX7 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC27■■□□□ 1.91
Col16a1Q8BLX7 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC27■■□□□ 1.91
Col16a1Q8BLX7 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC27■■□□□ 1.91
Retrieved 100 of 76,532 protein–RNA pairs in 11.9 ms