Protein–RNA interactions for Protein: Q8BGD7

Npas4, Neuronal PAS domain-containing protein 4, mousemouse

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas4Q8BGD7 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Npas4Q8BGD7 Gm18671-201ENSMUST00000214826 683 ntBASIC21.52■■□□□ 1.04
Npas4Q8BGD7 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
Npas4Q8BGD7 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Npas4Q8BGD7 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
Npas4Q8BGD7 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC21.51■■□□□ 1.03
Npas4Q8BGD7 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Npas4Q8BGD7 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
Npas4Q8BGD7 Gm11421-201ENSMUST00000122124 294 ntBASIC21.51■■□□□ 1.03
Npas4Q8BGD7 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC21.51■■□□□ 1.03
Npas4Q8BGD7 Gm37179-201ENSMUST00000194862 823 ntBASIC21.51■■□□□ 1.03
Npas4Q8BGD7 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Npas4Q8BGD7 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Npas4Q8BGD7 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Npas4Q8BGD7 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Npas4Q8BGD7 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Npas4Q8BGD7 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Npas4Q8BGD7 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
Npas4Q8BGD7 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Npas4Q8BGD7 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
Npas4Q8BGD7 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Npas4Q8BGD7 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Npas4Q8BGD7 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Npas4Q8BGD7 Gm10033-202ENSMUST00000211874 928 ntBASIC21.49■■□□□ 1.03
Npas4Q8BGD7 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Npas4Q8BGD7 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
Npas4Q8BGD7 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Npas4Q8BGD7 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Npas4Q8BGD7 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Npas4Q8BGD7 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Npas4Q8BGD7 Gm44949-201ENSMUST00000206423 1450 ntBASIC21.49■■□□□ 1.03
Npas4Q8BGD7 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Npas4Q8BGD7 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Npas4Q8BGD7 Gm37415-201ENSMUST00000192265 2054 ntBASIC21.48■■□□□ 1.03
Npas4Q8BGD7 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Npas4Q8BGD7 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Npas4Q8BGD7 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
Npas4Q8BGD7 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Npas4Q8BGD7 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Npas4Q8BGD7 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
Npas4Q8BGD7 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Npas4Q8BGD7 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Npas4Q8BGD7 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Npas4Q8BGD7 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Npas4Q8BGD7 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Npas4Q8BGD7 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Npas4Q8BGD7 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Npas4Q8BGD7 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
Npas4Q8BGD7 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC21.46■■□□□ 1.03
Npas4Q8BGD7 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC21.46■■□□□ 1.03
Npas4Q8BGD7 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Npas4Q8BGD7 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC21.45■■□□□ 1.02
Npas4Q8BGD7 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC21.45■■□□□ 1.02
Npas4Q8BGD7 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Npas4Q8BGD7 AV356131-201ENSMUST00000206201 750 ntBASIC21.45■■□□□ 1.02
Npas4Q8BGD7 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
Npas4Q8BGD7 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Npas4Q8BGD7 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC21.45■■□□□ 1.02
Npas4Q8BGD7 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC21.45■■□□□ 1.02
Npas4Q8BGD7 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC21.44■■□□□ 1.02
Npas4Q8BGD7 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Npas4Q8BGD7 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Npas4Q8BGD7 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Npas4Q8BGD7 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Npas4Q8BGD7 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Npas4Q8BGD7 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC21.44■■□□□ 1.02
Npas4Q8BGD7 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Npas4Q8BGD7 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Npas4Q8BGD7 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Npas4Q8BGD7 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC21.43■■□□□ 1.02
Npas4Q8BGD7 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Npas4Q8BGD7 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC21.43■■□□□ 1.02
Npas4Q8BGD7 Gm42778-201ENSMUST00000199644 553 ntBASIC21.43■■□□□ 1.02
Npas4Q8BGD7 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Npas4Q8BGD7 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Npas4Q8BGD7 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Npas4Q8BGD7 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Npas4Q8BGD7 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Npas4Q8BGD7 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Npas4Q8BGD7 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Npas4Q8BGD7 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Npas4Q8BGD7 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC21.42■■□□□ 1.02
Npas4Q8BGD7 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC21.42■■□□□ 1.02
Npas4Q8BGD7 Mir6236-201ENSMUST00000184437 123 ntBASIC21.42■■□□□ 1.02
Npas4Q8BGD7 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Npas4Q8BGD7 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Npas4Q8BGD7 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Npas4Q8BGD7 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
Npas4Q8BGD7 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Npas4Q8BGD7 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Npas4Q8BGD7 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Npas4Q8BGD7 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Npas4Q8BGD7 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Npas4Q8BGD7 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
Npas4Q8BGD7 AC137127.1-201ENSMUST00000213466 1078 ntBASIC21.41■■□□□ 1.02
Npas4Q8BGD7 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Npas4Q8BGD7 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC21.4■■□□□ 1.02
Npas4Q8BGD7 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Npas4Q8BGD7 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC21.4■■□□□ 1.02
Npas4Q8BGD7 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms