Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Upk3bQ80YF6 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Upk3bQ80YF6 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Upk3bQ80YF6 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
Upk3bQ80YF6 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Upk3bQ80YF6 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Upk3bQ80YF6 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Upk3bQ80YF6 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
Upk3bQ80YF6 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Upk3bQ80YF6 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Upk3bQ80YF6 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC17.08■□□□□ 0.32
Upk3bQ80YF6 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Upk3bQ80YF6 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Upk3bQ80YF6 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Upk3bQ80YF6 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Upk3bQ80YF6 Gm37035-201ENSMUST00000194809 2148 ntBASIC17.08■□□□□ 0.32
Upk3bQ80YF6 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Upk3bQ80YF6 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Upk3bQ80YF6 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Upk3bQ80YF6 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Upk3bQ80YF6 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Upk3bQ80YF6 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC17.07■□□□□ 0.32
Upk3bQ80YF6 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Upk3bQ80YF6 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Upk3bQ80YF6 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
Upk3bQ80YF6 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Upk3bQ80YF6 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Upk3bQ80YF6 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Upk3bQ80YF6 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Upk3bQ80YF6 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Upk3bQ80YF6 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Upk3bQ80YF6 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Upk3bQ80YF6 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Upk3bQ80YF6 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Upk3bQ80YF6 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Upk3bQ80YF6 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC17.05■□□□□ 0.32
Upk3bQ80YF6 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Upk3bQ80YF6 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Upk3bQ80YF6 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Upk3bQ80YF6 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Upk3bQ80YF6 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Upk3bQ80YF6 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Upk3bQ80YF6 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC17.05■□□□□ 0.32
Upk3bQ80YF6 Gm12366-201ENSMUST00000121722 873 ntBASIC17.05■□□□□ 0.32
Upk3bQ80YF6 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC17.05■□□□□ 0.32
Upk3bQ80YF6 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Upk3bQ80YF6 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC17.05■□□□□ 0.32
Upk3bQ80YF6 Gm5786-201ENSMUST00000085368 882 ntBASIC17.05■□□□□ 0.32
Upk3bQ80YF6 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Upk3bQ80YF6 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Upk3bQ80YF6 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Upk3bQ80YF6 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC17.04■□□□□ 0.32
Upk3bQ80YF6 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Upk3bQ80YF6 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Upk3bQ80YF6 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Upk3bQ80YF6 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC17.04■□□□□ 0.32
Upk3bQ80YF6 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Upk3bQ80YF6 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
Upk3bQ80YF6 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC17.04■□□□□ 0.32
Upk3bQ80YF6 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Upk3bQ80YF6 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Upk3bQ80YF6 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Upk3bQ80YF6 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC17.04■□□□□ 0.32
Upk3bQ80YF6 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Upk3bQ80YF6 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Upk3bQ80YF6 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Upk3bQ80YF6 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Upk3bQ80YF6 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC17.03■□□□□ 0.32
Upk3bQ80YF6 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Upk3bQ80YF6 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Upk3bQ80YF6 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Upk3bQ80YF6 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Upk3bQ80YF6 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Upk3bQ80YF6 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Upk3bQ80YF6 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Upk3bQ80YF6 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Upk3bQ80YF6 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Upk3bQ80YF6 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Upk3bQ80YF6 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Upk3bQ80YF6 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Upk3bQ80YF6 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Upk3bQ80YF6 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Upk3bQ80YF6 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Upk3bQ80YF6 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Upk3bQ80YF6 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Upk3bQ80YF6 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Upk3bQ80YF6 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Upk3bQ80YF6 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Upk3bQ80YF6 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Upk3bQ80YF6 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Upk3bQ80YF6 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Upk3bQ80YF6 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Upk3bQ80YF6 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Upk3bQ80YF6 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Upk3bQ80YF6 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Upk3bQ80YF6 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.01■□□□□ 0.31
Upk3bQ80YF6 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Upk3bQ80YF6 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Upk3bQ80YF6 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Upk3bQ80YF6 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms