Protein–RNA interactions for Protein: Q80WV7

Srrm3, Serine/arginine repetitive matrix protein 3, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm3Q80WV7 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Srrm3Q80WV7 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Srrm3Q80WV7 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Srrm3Q80WV7 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Srrm3Q80WV7 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Srrm3Q80WV7 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Srrm3Q80WV7 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Srrm3Q80WV7 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Srrm3Q80WV7 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Srrm3Q80WV7 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Srrm3Q80WV7 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC21.02■□□□□ 0.96
Srrm3Q80WV7 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Srrm3Q80WV7 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Srrm3Q80WV7 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Srrm3Q80WV7 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Srrm3Q80WV7 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Srrm3Q80WV7 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Srrm3Q80WV7 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.95
Srrm3Q80WV7 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Srrm3Q80WV7 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Srrm3Q80WV7 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Srrm3Q80WV7 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Srrm3Q80WV7 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
Srrm3Q80WV7 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Srrm3Q80WV7 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC21.01■□□□□ 0.95
Srrm3Q80WV7 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Srrm3Q80WV7 Gm18755-201ENSMUST00000218030 1099 ntBASIC21.01■□□□□ 0.95
Srrm3Q80WV7 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Srrm3Q80WV7 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Srrm3Q80WV7 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Srrm3Q80WV7 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Srrm3Q80WV7 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC21■□□□□ 0.95
Srrm3Q80WV7 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Srrm3Q80WV7 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Srrm3Q80WV7 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC21■□□□□ 0.95
Srrm3Q80WV7 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC21■□□□□ 0.95
Srrm3Q80WV7 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Srrm3Q80WV7 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Srrm3Q80WV7 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Srrm3Q80WV7 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Srrm3Q80WV7 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Srrm3Q80WV7 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Srrm3Q80WV7 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Srrm3Q80WV7 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Srrm3Q80WV7 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Srrm3Q80WV7 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC20.99■□□□□ 0.95
Srrm3Q80WV7 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Srrm3Q80WV7 AC158990.1-201ENSMUST00000221450 2016 ntBASIC20.99■□□□□ 0.95
Srrm3Q80WV7 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Srrm3Q80WV7 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.99■□□□□ 0.95
Srrm3Q80WV7 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Srrm3Q80WV7 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC20.99■□□□□ 0.95
Srrm3Q80WV7 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Srrm3Q80WV7 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Srrm3Q80WV7 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Srrm3Q80WV7 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Srrm3Q80WV7 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Srrm3Q80WV7 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Srrm3Q80WV7 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Srrm3Q80WV7 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
Srrm3Q80WV7 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Srrm3Q80WV7 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Srrm3Q80WV7 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Srrm3Q80WV7 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Srrm3Q80WV7 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Srrm3Q80WV7 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Srrm3Q80WV7 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Srrm3Q80WV7 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Srrm3Q80WV7 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
Srrm3Q80WV7 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Srrm3Q80WV7 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC20.97■□□□□ 0.95
Srrm3Q80WV7 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Srrm3Q80WV7 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Srrm3Q80WV7 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Srrm3Q80WV7 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Srrm3Q80WV7 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Srrm3Q80WV7 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.96■□□□□ 0.95
Srrm3Q80WV7 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC20.96■□□□□ 0.95
Srrm3Q80WV7 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Srrm3Q80WV7 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Srrm3Q80WV7 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Srrm3Q80WV7 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Srrm3Q80WV7 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Srrm3Q80WV7 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC20.95■□□□□ 0.94
Srrm3Q80WV7 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC20.95■□□□□ 0.94
Srrm3Q80WV7 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Srrm3Q80WV7 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Srrm3Q80WV7 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Srrm3Q80WV7 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC20.95■□□□□ 0.94
Srrm3Q80WV7 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Srrm3Q80WV7 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Srrm3Q80WV7 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Srrm3Q80WV7 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Srrm3Q80WV7 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Srrm3Q80WV7 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Srrm3Q80WV7 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Srrm3Q80WV7 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Srrm3Q80WV7 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Srrm3Q80WV7 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
Srrm3Q80WV7 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms