Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Prpf40bQ80W14 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
Prpf40bQ80W14 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Prpf40bQ80W14 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC23.32■■□□□ 1.32
Prpf40bQ80W14 Gm42642-201ENSMUST00000200683 355 ntBASIC23.32■■□□□ 1.32
Prpf40bQ80W14 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC23.32■■□□□ 1.32
Prpf40bQ80W14 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Prpf40bQ80W14 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC23.32■■□□□ 1.32
Prpf40bQ80W14 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC23.32■■□□□ 1.32
Prpf40bQ80W14 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Prpf40bQ80W14 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
Prpf40bQ80W14 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Prpf40bQ80W14 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Prpf40bQ80W14 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Prpf40bQ80W14 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Prpf40bQ80W14 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
Prpf40bQ80W14 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
Prpf40bQ80W14 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
Prpf40bQ80W14 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC23.3■■□□□ 1.32
Prpf40bQ80W14 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
Prpf40bQ80W14 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
Prpf40bQ80W14 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
Prpf40bQ80W14 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC23.3■■□□□ 1.32
Prpf40bQ80W14 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
Prpf40bQ80W14 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Prpf40bQ80W14 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC23.29■■□□□ 1.32
Prpf40bQ80W14 Gm12251-201ENSMUST00000117893 792 ntBASIC23.29■■□□□ 1.32
Prpf40bQ80W14 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC23.29■■□□□ 1.32
Prpf40bQ80W14 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Prpf40bQ80W14 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Prpf40bQ80W14 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC23.28■■□□□ 1.32
Prpf40bQ80W14 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Prpf40bQ80W14 Gm10849-201ENSMUST00000100397 618 ntBASIC23.28■■□□□ 1.32
Prpf40bQ80W14 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Prpf40bQ80W14 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Prpf40bQ80W14 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Prpf40bQ80W14 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Prpf40bQ80W14 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC23.27■■□□□ 1.32
Prpf40bQ80W14 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Prpf40bQ80W14 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Prpf40bQ80W14 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Prpf40bQ80W14 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Prpf40bQ80W14 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.31
Prpf40bQ80W14 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Prpf40bQ80W14 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC23.26■■□□□ 1.31
Prpf40bQ80W14 Gm8770-201ENSMUST00000121113 1109 ntBASIC23.26■■□□□ 1.31
Prpf40bQ80W14 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Prpf40bQ80W14 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Prpf40bQ80W14 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Prpf40bQ80W14 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
Prpf40bQ80W14 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Prpf40bQ80W14 Gm26833-201ENSMUST00000180899 440 ntBASIC23.25■■□□□ 1.31
Prpf40bQ80W14 AC099934.2-201ENSMUST00000196389 70 ntBASIC23.25■■□□□ 1.31
Prpf40bQ80W14 AC156953.1-201ENSMUST00000196953 70 ntBASIC23.25■■□□□ 1.31
Prpf40bQ80W14 AC157822.2-201ENSMUST00000200291 70 ntBASIC23.25■■□□□ 1.31
Prpf40bQ80W14 Gm43060-201ENSMUST00000200621 289 ntBASIC23.25■■□□□ 1.31
Prpf40bQ80W14 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
Prpf40bQ80W14 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC23.25■■□□□ 1.31
Prpf40bQ80W14 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Prpf40bQ80W14 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
Prpf40bQ80W14 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Prpf40bQ80W14 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Prpf40bQ80W14 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Prpf40bQ80W14 Gm43006-201ENSMUST00000197702 1602 ntBASIC23.24■■□□□ 1.31
Prpf40bQ80W14 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC23.24■■□□□ 1.31
Prpf40bQ80W14 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Prpf40bQ80W14 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
Prpf40bQ80W14 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Prpf40bQ80W14 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Prpf40bQ80W14 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
Prpf40bQ80W14 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC23.24■■□□□ 1.31
Prpf40bQ80W14 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC23.24■■□□□ 1.31
Prpf40bQ80W14 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Prpf40bQ80W14 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Prpf40bQ80W14 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Prpf40bQ80W14 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Prpf40bQ80W14 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC23.23■■□□□ 1.31
Prpf40bQ80W14 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC23.23■■□□□ 1.31
Prpf40bQ80W14 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Prpf40bQ80W14 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
Prpf40bQ80W14 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Prpf40bQ80W14 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Prpf40bQ80W14 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Prpf40bQ80W14 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
Prpf40bQ80W14 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Prpf40bQ80W14 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Prpf40bQ80W14 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Prpf40bQ80W14 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Prpf40bQ80W14 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Prpf40bQ80W14 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC23.22■■□□□ 1.31
Prpf40bQ80W14 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
Prpf40bQ80W14 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
Prpf40bQ80W14 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Prpf40bQ80W14 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Prpf40bQ80W14 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Prpf40bQ80W14 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Prpf40bQ80W14 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Prpf40bQ80W14 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Prpf40bQ80W14 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC23.21■■□□□ 1.31
Prpf40bQ80W14 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms